Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0229 ATGGGGAGGTTGTTTGTGGTTCATCTAGAGGGTAAGATCTATAGCTGCAAACACTGCCGTACCCATCTTGCTCTTTCTGAAGACATCGTTTCAAAGTTCGTTCTCTCATGTGGGTATGAATATTCACAGCAGCATCATGTAATGGGTATTGAATTTTATTTAGGTAGTCTTTCCATTCCAGACATGGGAAAGCTTATCTCTTCAATAAGGGTGAATGTTTCCTTTGGCGAAAAAGATGATAGAGAGATGACAACTGGATTGCATACTGTTGCTGACATTTTCTGTGTGGGTTGTGGATCAATTGTTGGTTGGAAATATGAGACTGCTCATGAGAATAGCCAGAAGTACAAGGAAGGAAAATCTGTTATTGAACGGTTCAAGGTGTCAGGTCCTGATGGTAGCAATTATTGGATCAACCATGAAGCAAATGGTGGTGGAAGTGATGCAGATGATGGGCAAATTTACATGACTGGTTTACTTTGA 483 0.4058 MGRLFVVHLEGKIYSCKHCRTHLALSEDIVSKFVLSCGYEYSQQHHVMGIEFYLGSLSIPDMGKLISSIRVNVSFGEKDDREMTTGLHTVADIFCVGCGSIVGWKYETAHENSQKYKEGKSVIERFKVSGPDGSNYWINHEANGGGSDADDGQIYMTGLL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0229 160 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 128 IPR004910 -
Lal22g0229 160 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 70 151 IPR039058 -
Lal22g0229 160 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 34 IPR039058 -
Lal22g0229 160 ProSiteProfiles Yippee domain profile. 12 132 IPR034751 -
Lal22g0229 160 PANTHER PROTEIN YIPPEE-LIKE 70 151 - -
Lal22g0229 160 PANTHER PROTEIN YIPPEE-LIKE 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0229 Lal-Chr22 1426667 1429704 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0229 - - lang:109357439 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0229 22 1426667 1429704 Lal22g0229 22 1426667 1429704 ECH
Lal18g1370 18 16046764 16050371 Lal22g0229 22 1426667 1429704 LSH
Lal22g0229 22 1426667 1429704 Lal6g0240 6 1575146 1578137 LSH
Lal18g1370 18 16046764 16050371 Lal22g0229 22 1426667 1429704 PCT
Lal22g0229 22 1426667 1429704 Lal18g1370 18 16046764 16050371 PCT