Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0064 ATGGAGTTCGATTCCATCCCAATAGGTACATGTTCAAAAGAACACCAAACAATCTATCACGAATGGTTCAATTACGCTGATTCAGATAGCGATGGACGCATCACGGGGAGTGATGCCACCAAGTTTTTCTCAATGTCCAATTTGTCTCGTCAAGATCTTAAGCAGGTGTGGGCTATTGCAGATTCGAAGCGACAAGGATATCTTGGTTTCGCTGAGTTTATCATTGCTATGCAGCTAGTTTCTTTAGCACAATCTGGGCTCCCAGTAACACATGATCTGCTGACTAGCGATGTTGATTTGATGAATCTGAAACCTCCCACGATGGAGGGTTTGGATGCATTACTAGCCAAGCAAAAGCATAAACAGAAAGATCTTGATGTGAATGTAATTAGCAATATTGCAGTTAGTTCTCAGTTGAAGCCATCACCATCAAGTAATTGGTTTTCTACAAATTCAACAAAAAAGGTGCCCCTGTCCTCTGTGACATCAATAATTGATGGATTGAAAAGACTCTATGTTCAAAAGTTGAAGCCATTGGAAGTTACTTACCATTTTAATGATTTCGTATCACCATTACTGACAAATAGCGATTTTGAAAGCAAACCAATGGTTATGCTTCTGGGTCAGTATTCAACTGGAGCACATATTGGACCAGAGCCTACAACTGATAGGTTTGTTGTTGTCATGTCTGGACCTGATGAGAGAAGCATTCCTGGAAACACTATTGCCGTCCAAGCAGACATGCCATTTAGTGGTCTTACAACTTTCGGAACAGCTTTTTTGTCAAAATTTGAGTGTTCTCAAATGCCTCATCCTCTACTCGAGCATATTACATTTGTGGATAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACACAACGGGCATATGATTTTACGGGTGTAACATCTTGGTTTGCTTCTAAGTGTGATTTGATACTCCTCCTGTTTGATCCCCACAAACTTGATGTCAGTGATGAGTTCAAGCGTGTGATATCATCCTTGCGGGGGAACGATGACAAAATTCGAGTGGTTTTGAACAAGGCAGACCAAGTTGATACTCAGCAACTGATGAGGGTTTATGGAGCCTTAATGTGGTCACTTGGGAAGGTGCTGAATACACCAGAAGTAATGCGTGTTTATATTGGCTCCTTCAATGACAAGCCTATAAATGATGCTGTCAGTGGCCCACTCGGCAAGGAACTCTTTGAAAAAGAACAGGATGACCTTCTTTCGAATCTGAAAGATATACCTAAGAAAGCTTGTGATCGAAGGATCAATGAATTTGTAAAACGAGCCCGTGCTGCCAAGATACATGCTTATATTGTCAGTCATCTTAAAAAGGAGATGCCTGCTATGATAGGCAAAGCAAAAGCTCAGCAAAAGCTCATTGATAACTTGGATGGTGAATTTGGAAAGGTACAAAAGGAGTTCCATCTACCTCCTGGTGACTTCCCAAATGTTGAACATTACAGAGAGATCTTGAGTGGTTATAATATTGATAAGTTTGAGAAATTGAAACCAAAAATGATACAAGCTGTTGATGACATGCTAGGCTATGACATTCCTAACCTCTTGAAGAATTTTAGAAATCCCTATGACTCTTGA 1608 0.4061 MEFDSIPIGTCSKEHQTIYHEWFNYADSDSDGRITGSDATKFFSMSNLSRQDLKQVWAIADSKRQGYLGFAEFIIAMQLVSLAQSGLPVTHDLLTSDVDLMNLKPPTMEGLDALLAKQKHKQKDLDVNVISNIAVSSQLKPSPSSNWFSTNSTKKVPLSSVTSIIDGLKRLYVQKLKPLEVTYHFNDFVSPLLTNSDFESKPMVMLLGQYSTGAHIGPEPTTDRFVVVMSGPDERSIPGNTIAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTQRAYDFTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGNDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINDAVSGPLGKELFEKEQDDLLSNLKDIPKKACDRRINEFVKRARAAKIHAYIVSHLKKEMPAMIGKAKAQQKLIDNLDGEFGKVQKEFHLPPGDFPNVEHYREILSGYNIDKFEKLKPKMIQAVDDMLGYDIPNLLKNFRNPYDS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0064 535 PANTHER CALCIUM-BINDING EF HAND PROTEIN 20 532 - -
Lal6g0064 535 Pfam N-terminal EH-domain containing protein 167 199 IPR031692 -
Lal6g0064 535 Pfam Domain of unknown function (DUF5600) 424 525 IPR040990 -
Lal6g0064 535 PANTHER EH DOMAIN 20 532 - -
Lal6g0064 535 SUPERFAMILY EF-hand 11 86 IPR011992 -
Lal6g0064 535 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 183 419 IPR030381 GO:0005525
Lal6g0064 535 Gene3D - 168 525 - -
Lal6g0064 535 Gene3D - 10 109 - -
Lal6g0064 535 Gene3D - 204 417 IPR027417 -
Lal6g0064 535 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Lal6g0064 535 ProSiteProfiles EH domain profile. 15 93 IPR000261 GO:0005515
Lal6g0064 535 CDD EH 19 85 IPR000261 GO:0005515
Lal6g0064 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 456 IPR027417 -
Lal6g0064 535 Pfam Cytoskeletal-regulatory complex EF hand 19 80 IPR000261 GO:0005515
Lal6g0064 535 SMART eh_3 8 103 IPR000261 GO:0005515
Lal6g0064 535 CDD EHD 203 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0064 Lal-Chr6 390145 395729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0064 1 534 EF-hand Containing Proteins AT3G20290 79.417 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0064 K12483 - gmx:100804468 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0064 6 390145 395729 Lal6g0064 6 390145 395729 ECH
Lal18g1587 18 17416816 17421865 Lal6g0064 6 390145 395729 LSH
Lal22g0064 22 390678 391331 Lal6g0064 6 390145 395729 LSH