Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0064 CACACTGTACAGTCTGGACCTGATGAGAGAAGCATTCCTGGAAATACTATTGCTGTCCAAGCAGACATGCCATTTAGTGGTCTTACAACTTTTGGAACATCTTTTTTGTCAAAGTTTGAGTGTTCTCAAATGCATCATCCTCTACTAGAGCATATTACATTTGTGGACAGTCCTGGAGTTCTATCCGGAGATAAGCAACGAACACAAAGAGCATATGATTTTACGGGTGTAACATCTTGGTTTGCTGCTAAGTGTGATTTGATTCTCCTCCTGTTTGATCCTCACAAACTTGATATTAGTGATGAGTTCAAGCGTGTGATATCCTCCTTACGTGGGAACGATGACAAAGTTCGAGTGGTTTTGAATAAGGCAGACCAAGTTGATACTCAGCAACTGATGAGGGTTTATGGAGCTTTAATGTGGTCACTTGGGAAGGTGCTGAATACACCTGAAGTCATGCATGTGTATGTA 471 0.414 HTVQSGPDERSIPGNTIAVQADMPFSGLTTFGTSFLSKFECSQMHHPLLEHITFVDSPGVLSGDKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVISSLRGNDDKVRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVMHVYV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0064 157 Pfam Dynamin family 25 124 IPR045063 -
Lal22g0064 157 PANTHER OS02G0158100 PROTEIN 3 157 - -
Lal22g0064 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 146 IPR027417 -
Lal22g0064 157 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 1 157 IPR030381 GO:0005525
Lal22g0064 157 Gene3D - 1 157 IPR027417 -
Lal22g0064 157 PANTHER EH DOMAIN 3 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0064 Lal-Chr22 390678 391331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0064 3 157 EF-hand Containing Proteins AT3G20290 90.968 6.58e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0064 K12483 - zju:107403606 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0064 22 390678 391331 Lal22g0064 22 390678 391331 ECH
Lal18g1587 18 17416816 17421865 Lal22g0064 22 390678 391331 LSH
Lal22g0064 22 390678 391331 Lal6g0064 6 390145 395729 LSH