Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0050 ATTGCTTTCTTTGTTGTTGGAGGAATTCAAGTTGAGTTCCAGATTCCCAGTCACTCTGATATCATGGACTCCCCACAATCTGTTGTGTCACCATTCAAGAGCTCAGGTGCCTTGTCTAAGGACATTGAAGTCAATGGAAAAGAAGCTGTCATTTCTAATCATGATGAGTCCATTGGTGTCATTGATGTTTTCATACATCAGGCTAGGGACATTCAAAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCTTGACAAGTGATCCTGAGAATACTGTCTCCACCAAGACTATCAATGGAGGAGGAAGAAACCCCGTGTTCAATGAGAATCTTCGCCTAAGCGTTAGGACTGTTGATTCTGCTCTAAAATGTGAGATTTGGATGCTGAGCAGGGTGAAGAACTACCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTGCTGGTGAAGAAGGATGCAAAACTAGAGAAAGAGTTCTCAGTGTCATCAACTGATCTATTCCATTCCCCTGCAGGGTTTATTCAATTGTCTCTTGCTTACACTGGTGCCTCACCCGATGTTATGGCAATTTCCGTAATGCCTACGGATTTGGCTACCGAGAGGGACTTGGAATCAGAAACATCTGAGTCAATGGTTAGAGATTTAGATAAAATTGAGTTCCCTGATCCCAAAATTTTAAATGAAGACCACTTGATGGTTTCAGAATATTATGGCATTCCCTGTGATGAGAGTCAGTGCACTAATAATAGCTTCGTCAACACAGATGTAGAAAACTGTAGTTCTGAAGCAGGTGTTCATCTTGTGGAAAGCTTTTCAGCATGTGGTGTTGAGTCTGTTCAACCTCCTAAGGTTGATAATGAGTCTCCACCCAGCAGTGTGTCAACAAATGGAGTTTCCTCTCCTTTGGCGGCTGCAAAATCGGACTCATTCGACGCTGCTTCTTCTAAGTTTCCCGTTCAGGAACAAGTTTCAGGCGCCAAAGAGAAAATTGTGGATGCCAAAGATGGTGATAGTAATTCTTCCAATGGTGTGGTGAGTGAGTCATTCCCAAAGCCTTTTGTGACTGTGAACATTGAGCCTGAGCCAAAGGTAGTGCAGCAGGATATAGTAGATATGTACATGAAAAGCATGCAACAATCATTAGCAAACATGAAGCTTCCTTTGGACTTTGAAAGTGGACCAAATAGTTCAGGAAGCTCAACCTCTGAGCAGAAACTACAGGCATCAAAGAACGGTAACTCCTCCCGTGTATTTTATGGGAGCAGAGCTTTCTTCTGA 1299 0.4265 IAFFVVGGIQVEFQIPSHSDIMDSPQSVVSPFKSSGALSKDIEVNGKEAVISNHDESIGVIDVFIHQARDIQNICIYHKQDVYAKICLTSDPENTVSTKTINGGGRNPVFNENLRLSVRTVDSALKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKKDAKLEKEFSVSSTDLFHSPAGFIQLSLAYTGASPDVMAISVMPTDLATERDLESETSESMVRDLDKIEFPDPKILNEDHLMVSEYYGIPCDESQCTNNSFVNTDVENCSSEAGVHLVESFSACGVESVQPPKVDNESPPSSVSTNGVSSPLAAAKSDSFDAASSKFPVQEQVSGAKEKIVDAKDGDSNSSNGVVSESFPKPFVTVNIEPEPKVVQQDIVDMYMKSMQQSLANMKLPLDFESGPNSSGSSTSEQKLQASKNGNSSRVFYGSRAFF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0050 432 ProSiteProfiles C2 domain profile. 34 166 IPR000008 -
Lal6g0050 432 MobiDBLite consensus disorder prediction 394 421 - -
Lal6g0050 432 SMART C2_3c 60 163 IPR000008 -
Lal6g0050 432 PANTHER EXPRESSED PROTEIN 22 432 - -
Lal6g0050 432 Pfam C2 domain 60 163 IPR000008 -
Lal6g0050 432 Gene3D C2 domain 53 213 IPR035892 -
Lal6g0050 432 MobiDBLite consensus disorder prediction 332 353 - -
Lal6g0050 432 MobiDBLite consensus disorder prediction 291 309 - -
Lal6g0050 432 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 22 432 - -
Lal6g0050 432 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 55 189 IPR035892 -
Lal6g0050 432 MobiDBLite consensus disorder prediction 285 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0050 Lal-Chr6 309896 314024 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0050 - - gmx:100781587 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0050 6 309896 314024 Lal6g0050 6 309896 314024 ECH
Lal18g1600 18 17493828 17497152 Lal6g0050 6 309896 314024 LSH
Lal3g0818 3 7493964 7498980 Lal6g0050 6 309896 314024 PCT
Lal18g1600 18 17493828 17497152 Lal6g0050 6 309896 314024 PCT
Lal6g0050 6 309896 314024 Lal3g0818 3 7493964 7498980 PCT
Lal6g0050 6 309896 314024 Lal18g1600 18 17493828 17497152 PCT