Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0818 ATGAAGTTTGTAGCTTTATTGGAATCTGGTGAAATTTGGCACCACCCTTTTGTTCCCAGTGATATCAGCATGGATTCTCCACAATGTGTTGTGTCACCATTTAAGAACTCAGATTTTAGTGAGGATGAGAAGCACAAGAGTGATGTTTTCACACAAAGCTCTATCCCTTTATCTAAGGACATTGAAGTCAATGAAAAGGAAACTATCATGTCAAATGAGAATGAATTCATTGGTGTGCTTGGTGTTTATATACATCAGGCAAGGGACATTCATAACATCTGCATATACCATAAGCAAGATGTTTATGCTAAGATCTTCCTCACTAGTAACCCTGAAAATACTGTGTCTACCAAAACTATCAATGGAGGAGGTCGGAACCCCGTGTTTAACGAGAGTCTTAGTATCGGTGTCGGGACTGTTGAGTCTTCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGATCAGTTACTTGGTTTTGCTTTGGTACCTTTGTCTGAAGTACTAGTCCAGAATGGAAAACTGGAGAAAGAGTTCTCACTTTCTTCAACTGATCTGTTCCATTCTCCTGTTGGTTTTGTTCAATTGTCTCTTGCTTATACCGGTGCTTCACCCGATGTTATGGAAATTTCTGCAATGCCAACCGAGGTTGTCAAACATGTTGCCGTGCAGGACACAGAAACATCTTCGTCACTGACAAGGGATTTGGATAAAATTGAGTTCCCAGATCCTAAAATTTTAACTGAAGACCACTTGATGGTTTCGGAATATTGTGGCATTCCTTGTGAGGAGACTCAGTGCTCTGATAGCTCTGAAAATCAAAGTTCTGAAGCAGGTGTTCGGCTCGTCAATTGCTTCTCTACATGCAGTGTTGAATCTGTTCAACCTCCTAAGGTTGATTCTCCACTAAGCAGTGTGTCAACAAATGGTGCTTCTTCACCTTTTGTGTGTGCAAGCTCAGAATCCTCCGATGCTGCCGCTGTTACGGCTTCTAAGTCTCCCAATCAGCAAGAAGTTTCAAGCACCATAGAGGGAAACAATGTGGATGTTAAAGATGGGGAGAATAATTCTTCAAATGGGGTTCCTAGTGACTCATTCCCCAAGCCTATTCTGACTGTGAACATTGATCCAGAGCCAAAAGTGGTGCAGCAGGAGATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACCGAATCATTAGCAAAAATGAAACTTCCTATGGACATTGCAGCCGAAGCAACTAGTTCGGGAAACTCAAGCACTGATCAGAAACTACAGTCGTCAAAGAACGCTAGCTCCCGTATCTTTGGTACATGTGCCTCCTACAAACCCATGAAATCTGGCCGTTGTCCCTGTATCTCACTCGCCACAGTCCAAACTTTTCAGCAATATCCTTCCCAGTGGAGCATCCCCTTTCCCTTAAGAAATCAACTACCCATTGCTGTGCTGCTCTTAAGTCTTGTTGAATATCCCTTGAACCTTCCATGGACCTGTTTCTATGACCAATGGCAGCCCCCCCTACAATACCAGCAGCGGCTGCCCCGGCTGCGCCATAAAGAAGTGAAGAGCCAGCTAAGTGAGCCACTTCCTTGCTCAAGTCTGGTGCACCTATGGCGCCAAATGTGA 1644 0.4361 MKFVALLESGEIWHHPFVPSDISMDSPQCVVSPFKNSDFSEDEKHKSDVFTQSSIPLSKDIEVNEKETIMSNENEFIGVLGVYIHQARDIHNICIYHKQDVYAKIFLTSNPENTVSTKTINGGGRNPVFNESLSIGVGTVESSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPVGFVQLSLAYTGASPDVMEISAMPTEVVKHVAVQDTETSSSLTRDLDKIEFPDPKILTEDHLMVSEYCGIPCEETQCSDSSENQSSEAGVRLVNCFSTCSVESVQPPKVDSPLSSVSTNGASSPFVCASSESSDAAAVTASKSPNQQEVSSTIEGNNVDVKDGENNSSNGVPSDSFPKPILTVNIDPEPKVVQQEIVDMYMKSMQQFTESLAKMKLPMDIAAEATSSGNSSTDQKLQSSKNASSRIFGTCASYKPMKSGRCPCISLATVQTFQQYPSQWSIPFPLRNQLPIAVLLLSLVEYPLNLPWTCFYDQWQPPLQYQQRLPRLRHKEVKSQLSEPLPCSSLVHLWRQM 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0818 547 Pfam C2 domain 79 185 IPR000008 -
Lal3g0818 547 Gene3D C2 domain 73 235 IPR035892 -
Lal3g0818 547 MobiDBLite consensus disorder prediction 332 377 - -
Lal3g0818 547 CDD C2 82 186 - -
Lal3g0818 547 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 24 443 - -
Lal3g0818 547 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 76 207 IPR035892 -
Lal3g0818 547 SMART C2_3c 79 182 IPR000008 -
Lal3g0818 547 MobiDBLite consensus disorder prediction 332 370 - -
Lal3g0818 547 PANTHER EXPRESSED PROTEIN 24 443 - -
Lal3g0818 547 ProSiteProfiles C2 domain profile. 57 184 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0818 Lal-Chr3 7493964 7498980 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0818 - - lang:109350324 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0818 3 7493964 7498980 Lal3g0818 3 7493964 7498980 ECH
Lal3g0818 3 7493964 7498980 Lal18g1600 18 17493828 17497152 LSH
Lal3g0818 3 7493964 7498980 Lal18g1600 18 17493828 17497152 PCT
Lal3g0818 3 7493964 7498980 Lal6g0050 6 309896 314024 PCT
Lal18g1600 18 17493828 17497152 Lal3g0818 3 7493964 7498980 PCT
Lal6g0050 6 309896 314024 Lal3g0818 3 7493964 7498980 PCT