Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0033 ATGGAGAGAGAAGAAGCACTCTCTTTCAAAATCCATTCTTCTTCTTCTTCTGGAAGCTTCCACAACGACGGTGTTCTCTCTGGAGAGTCGTCCTCGGAGTTGTATAACCGGCACGTCTTTCTCTTTGATCGATTGCCTCGCCTGCTCTATGCTGCCCTTCTCACCAACAACACTCTCATTAACAACGAGACCCCCTTAACGATATGTGAGGGTCATGACGGGACTGAAACATCTAATGGGGATGTACTAATCTTTCCTGATATGATCAGATACAGGAGACTAACACATTTTGATGTTGAAACATTTGTTGAAGAAGTTCTAGTGAAGGATGGAGAATGGCTTCCCGGAGCCCCCGAAAGATTACAAGGCTCATATGTTTTTGTCTGTTCGCATGGATCCCGTGATCGTAGATGCGGTGTTTGTGGGCCTGTCTTGGTCAGTAGATTCAAGGAAGAGATAGAGTTACATTCTCTTCAAGGTAAAGTGTTTGTGAGCCCATGCTCACACATTGGGGGACATGAGTATGCAGGAAATGTCATTATATTTGGATCAAGCATGAATGGAGAAGTCACTGGGCACTGGTATGGATATGTTGCACCTGATGATGTACCTTTATTGATTCAACAGCATATCTTAAAGGGGAAGATTATAGACTCATTATGGAGACCAAGAACAAAGGCTTCTACTGAATGGCATAAGAAGTTCAGAAGAAAGCAGTGCAGCTCAAATGGAGTGGGCTGCTGCCAAGAAAATGGAGACTCTTCCTGCTGTCAGAATACCATATTAGTGGAAAAGAGAAAGAGCCCTGACACCATTGAGGTGGAGGCAAAACTCTTAGCTGATAGTAGTAACACCGAGACTGTAATTTCTAGGATCAAAAGTGGCAAAGAAGCTTTACGCAAGGTTCATTCCATGACATGGCTTGACGGCTGGGAGCAAGAAGATACATATGCTGCTCTTGCTGTGGCCTGTGCTGCCGTGTCAGTTGTCGTTGCCTATAAATTCTACAAAGAGTTGGTTTCTGCTGCTGCTGCTGCTGCTGTTTTTCTTCTCATAACAACTCTGATATACATTTATAATTGGTTCAACCAATGTCTATAA 1101 0.4369 MEREEALSFKIHSSSSSGSFHNDGVLSGESSSELYNRHVFLFDRLPRLLYAALLTNNTLINNETPLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKDGEWLPGAPERLQGSYVFVCSHGSRDRRCGVCGPVLVSRFKEEIELHSLQGKVFVSPCSHIGGHEYAGNVIIFGSSMNGEVTGHWYGYVAPDDVPLLIQQHILKGKIIDSLWRPRTKASTEWHKKFRRKQCSSNGVGCCQENGDSSCCQNTILVEKRKSPDTIEVEAKLLADSSNTETVISRIKSGKEALRKVHSMTWLDGWEQEDTYAALAVACAAVSVVVAYKFYKELVSAAAAAAVFLLITTLIYIYNWFNQCL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0033 366 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 42 338 IPR009737 -
Lal6g0033 366 Pfam Sucrase/ferredoxin-like 57 222 IPR009737 -
Lal6g0033 366 CDD TRX_Fd_Sucrase 123 224 IPR009737 -
Lal6g0033 366 Gene3D Glutaredoxin 123 225 - -
Lal6g0033 366 MobiDBLite consensus disorder prediction 1 22 - -
Lal6g0033 366 SUPERFAMILY Thioredoxin-like 125 226 IPR036249 -
Lal6g0033 366 PANTHER SUCRASE-LIKE PROTEIN 42 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0033 Lal-Chr6 234301 239458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0033 - - gmx:100780395 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0033 6 234301 239458 Lal6g0033 6 234301 239458 ECH
Lal22g0044 22 262560 266511 Lal6g0033 6 234301 239458 LSH
Lal3g0780 3 7014806 7018012 Lal6g0033 6 234301 239458 PCT
Lal6g0033 6 234301 239458 Lal3g0780 3 7014806 7018012 PCT