Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0044 ATGTCGAGTAACAGAGACAGAGAAGAATCTCTCTCTTTCACAATCCCTTCTTCTTCTTCTCACTCTTCTCCCATCACCGTCTCCGACCAACTCGACAGTTACCTCTCCGATCCACGAAGTGCCTCCGGAAGCTTCCAGAACGACGGTCTCCTCTCCGCCGATTCCTCTTCCGCTACTGCCGATTCCGATTTCGGATTCTCCAGACTCGATTTCCGTCAGAGCCCCCTCGCAGGCACCGTTGAGTTCTACCACCGCCACGTCTTCCTCTGCTACAAGAACCCTCGCTTCTGGCCACCACGCATCGAGGCTGCCGAGTTCGATCGATTGCCTAGGTTGCTCCATGTTGCCGTTGTGACCAAGAAGAATCACATGAAGAAGGAGACCCGCTTAACAATATGCGAGGGTCATGATGGAACTGAAACATCTAATGGAGATGTACTAATCTTTCCTGACATGATCAGATACAGGAGGTTAACACATTTTGATGTTGAAACATTTGTTGAAGAAGTTCTTGTGAAGGATGGAGAGTGGCTTCCTGGAACCCCCGAAGCATTAAAAGGTTCATATGTTTTTGTATGTTCGCATGGATCCCGTGATCGTAGATGCGGTGTTTGTGGGCCTGTCTTGGTCAGTAGATTCAAGGAAGAGATAGAGTTACATTCTCTTCAAGGTAAAGTGTTTGTGAGCCCATGCTCACACATTGGAGGACATAAGTATGCAGGAAACGTCATTATATTTGCATCAAGCATGAACGGAGAAGTCACTGGGCATTGGTATGGATATGTTACACCTGATGATGTACCTTTATTGATTCAACAACATATATTAACGGGGGAGATTGTAGACTCATTGTGGAGGGGTCAGATGGGTTTATCAGAAGATGAACAGATGAAAGACCAAGAACTACGACGTCTGCTGAATGGCATAAGAAGTCCAGAAGAAAGCAATGTAGTGCATATACTTCAAGACACTTTTGCAAGCTGCTGCCAATCAAATGGAGTGAGCTGCTGCCAATCAAATGGAGACTCTTCCTGCTGTCAGAATCCTGTGTTAGTCGAAAAGGCAAAGAACCCTGATGTCATTGAGACGGAGGCCAAGCTCTCAGCTGATAATAATAATAATAGCACTGACACTGTGATTTCTAGGATTAAAAGTGGGAAAGGAACTTCGCGAAAGTTTCATTCCACGACATGGCTTGACAGCTGGGAGCGAGAAGATACTTATGCTGCTCTTGCTGTGGGCTGTGCTGCTGTGTCAGTGTTCATTGCCTATAAATGCTACAAAGAGTTAACATAA 1296 0.4591 MSSNRDREESLSFTIPSSSSHSSPITVSDQLDSYLSDPRSASGSFQNDGLLSADSSSATADSDFGFSRLDFRQSPLAGTVEFYHRHVFLCYKNPRFWPPRIEAAEFDRLPRLLHVAVVTKKNHMKKETRLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALKGSYVFVCSHGSRDRRCGVCGPVLVSRFKEEIELHSLQGKVFVSPCSHIGGHKYAGNVIIFASSMNGEVTGHWYGYVTPDDVPLLIQQHILTGEIVDSLWRGQMGLSEDEQMKDQELRRLLNGIRSPEESNVVHILQDTFASCCQSNGVSCCQSNGDSSCCQNPVLVEKAKNPDVIETEAKLSADNNNNSTDTVISRIKSGKGTSRKFHSTTWLDSWEREDTYAALAVGCAAVSVFIAYKCYKELT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0044 431 MobiDBLite consensus disorder prediction 1 52 - -
Lal22g0044 431 SUPERFAMILY Thioredoxin-like 189 291 IPR036249 -
Lal22g0044 431 PANTHER SUCRASE-LIKE PROTEIN 60 430 - -
Lal22g0044 431 CDD TRX_Fd_Sucrase 187 289 IPR009737 -
Lal22g0044 431 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 60 430 IPR009737 -
Lal22g0044 431 Pfam Sucrase/ferredoxin-like 76 287 IPR009737 -
Lal22g0044 431 Gene3D Glutaredoxin 187 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0044 Lal-Chr22 262560 266511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0044 - - gmx:100780395 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0044 22 262560 266511 Lal22g0044 22 262560 266511 ECH
Lal22g0044 22 262560 266511 Lal6g0033 6 234301 239458 LSH
Lal3g0780 3 7014806 7018012 Lal22g0044 22 262560 266511 PCT
Lal22g0044 22 262560 266511 Lal3g0780 3 7014806 7018012 PCT