Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0780 ATGTTCAAGAACCCATCTTCCACTTTTTCTTATTCTTATTCTTCTTCTTCTCAAATAACAAGTGCTTCTGGAAACTCTTCCATCGCCGGCACTGTTGAGTTTTACCAGCGACATGTGTTTTTGTGCTATAAGAAACCGGAGATGTGGCCGCCGCGTATTGACGCGTCGGAGTTTGACCGTTTGCCACGGTTGCTGAATGCTGCTGTTGTAGCTAGGAAGAAAGATATGAATAAAAAGACTTGCTTAACGATATGTGAAGGGGATGACGAGACTGAAGTATCGAATGGAGATTTACTAATCTTTCCGGATATGATCAGATACAGGAGGTTAACACATTTTGATGTTGAATCATTTGTTGAAGAAGTTCTTGTCAATGGTGGAGAATGGCTTCCTGGAAAACCTGAAGCCTTAGAAGCTTCATATGTTTTTGTGTGCTCACACGGATCCCATGATCGTCGATGTGGGGTTTGTGGACCTATACTGGTCAGCAGATTCCGGGAAGAAGTCGAGTTATACGGTCTTCAAGGAAAAGTATTTGTTAGTCCATGCTCGAACATTGGTGGCCACCATGATGCAGGAAATGTCATTATATTTGGATCAAGCATTAATGGAAAAGTCACTGGGCACTGGTATGGATATGTTGCTCTTGAAGATGTGTCTGTACTGATTCAGCAACATATCATAAAAGGAAAAATTTTAGAATCTTTATGGAGGGGTCAGATGGGTTTATCAAAGAATGAGCAGAAGAAAAGTCAAGAACAAAGGCTTCAACTTAATGGTAAACAAGATTTAAAAGAAAGCACAGAAATGTTGATGCAGATGAAAGATAGTGAGATAAGCACTGCTGCATGTCAATCTCCGGACAACTTGGTTAGTTGTTGCCAAGAAAATGACGACTCTGCTCACTATCAGAACACGATCTCTCGGATCAATAGAGAGAAAAGGGCATCGTACAAGTTTCGTTCCATGTCAATGGAACTTGACAGCTGGGAGCGAGAAGATACGTATGCTGCTATTGCTGTTGTTTGCGCTGCTGCATCGGTTGCCTTCGCCTACAGCTGCTACAAACAGCTATGA 1077 0.4197 MFKNPSSTFSYSYSSSSQITSASGNSSIAGTVEFYQRHVFLCYKKPEMWPPRIDASEFDRLPRLLNAAVVARKKDMNKKTCLTICEGDDETEVSNGDLLIFPDMIRYRRLTHFDVESFVEEVLVNGGEWLPGKPEALEASYVFVCSHGSHDRRCGVCGPILVSRFREEVELYGLQGKVFVSPCSNIGGHHDAGNVIIFGSSINGKVTGHWYGYVALEDVSVLIQQHIIKGKILESLWRGQMGLSKNEQKKSQEQRLQLNGKQDLKESTEMLMQMKDSEISTAACQSPDNLVSCCQENDDSAHYQNTISRINREKRASYKFRSMSMELDSWEREDTYAAIAVVCAAASVAFAYSCYKQL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0780 358 CDD TRX_Fd_Sucrase 140 241 IPR009737 -
Lal3g0780 358 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 307 357 IPR009737 -
Lal3g0780 358 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 24 312 IPR009737 -
Lal3g0780 358 PANTHER SUCRASE-LIKE PROTEIN 307 357 - -
Lal3g0780 358 PANTHER SUCRASE-LIKE PROTEIN 24 312 - -
Lal3g0780 358 SUPERFAMILY Thioredoxin-like 141 243 IPR036249 -
Lal3g0780 358 Pfam Sucrase/ferredoxin-like 29 239 IPR009737 -
Lal3g0780 358 Gene3D Glutaredoxin 139 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0780 Lal-Chr3 7014806 7018012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0780 - - lang:109350298 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0780 3 7014806 7018012 Lal3g0780 3 7014806 7018012 ECH
Lal3g0780 3 7014806 7018012 Lal22g0044 22 262560 266511 PCT
Lal3g0780 3 7014806 7018012 Lal6g0033 6 234301 239458 PCT
Lal22g0044 22 262560 266511 Lal3g0780 3 7014806 7018012 PCT
Lal6g0033 6 234301 239458 Lal3g0780 3 7014806 7018012 PCT