Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0025 ATGGGTATGGAAGCAATTGACGAATCTTCCTTGAATCAAAGCTTATCTCCCACTAACGAGTCAGCAGAGGCTTCTAAGAGAACAGGTAACGTATGGAGTGCATCGGCACATATAATAACTGGTGTGTTAGGGGCAGGAGTGCTATCTCTAGCATGGTGTATGGCACAGCTTGGTTGGATTGGTGGTATATTGTGTATTCTACTCTTTGCACTTATTACCATTCTTTCATCAAACCTTCTTTCTGACTGTTATAGATACCCTCATCCTCAATATGGCCACATTACCAACTCCTCCTATCCTGCTGCTGTCAACCTCTACCTAGGTGAGACAAGGCAAATGATATGTGGACTGCTGGTTAATGCAAGCTTATATGGCTGTACTGTGGCCTTTGTTATTACATCTGCTGCCAGCATCAAAGCTATTTTCAAATCAAATTGCTATCACAAAGAAGGGCATCAGGCTCTTTGTAATCATGGGGATACAGTACTGTATATGATACTGTTTGGACTTGTTCAAGTCATACTCTCATTTATACCAGATCTCCACAATATGGCATGGATTTCAGCTACTGCAGCCTTAGCTTCCCTCACATACTCATTTATTGAACTAGGACTTGGCATAGCAACAGTGATAAAAAATGGAAGAATTATGGGGAGTGTTAAAGGAGTACCAGCTTCAAATCCTGCTCACAAAATATGGTTAGTCTTCCAAGCACTTGGTGATGTTGCCTTTGCATATCCATACACGGTCATCCTCCTTGAGATACAGGACACTATTAAGTCACCTCCAGCAGAAAACAAGACCATGAAAAAGGCCTCCTTAATTGCTATGTCCATTGTGACATTCTTGTACCTCTGTTGTGGAAGCTTTGGATATGCAGCTTTTGGAGATCAAACACCTGGAAATCTCTTGACAGGGTTTGGGTTTTATGAGCCTTACTGGCTCATTGACTTGGCTAATGTTTGCATCATTCTTCAATTGGTGGGATGTTATCAGATTTTCTGCCAGCCAATATATGGTGGTGTTGACAGATGGTGTTCAAAAAAATACCCCAACAGTGGCTTTGTGAATAATCTCTACCAGTTGAAATTGCCTCTATTACCAGCTTTTCAGCTAAATCCTTTCAGGATATGTTTCCGAACAGCCTATGTAATTTCTACAACTGGACTTGGAATTCTATTTCCTTACTTCAATCAAGTAATTGGAGTGCTAGGAGCCTTAAGCTTTTGGCCACTGGCTATATATTTCCCAGTAGAGATGTACTTTGTGCAGGAGAAAATTGAAGCTTGGTCTAGTAAATGGATTGTTCTTAAGACATTTAGCCTTGTTTGCTTTCTTTTGACTGTAGTGGGCCTCATTGGATCAATTGAAGGAATCATAAGCCAGAAACTTAGCTGA 1398 0.4084 MGMEAIDESSLNQSLSPTNESAEASKRTGNVWSASAHIITGVLGAGVLSLAWCMAQLGWIGGILCILLFALITILSSNLLSDCYRYPHPQYGHITNSSYPAAVNLYLGETRQMICGLLVNASLYGCTVAFVITSAASIKAIFKSNCYHKEGHQALCNHGDTVLYMILFGLVQVILSFIPDLHNMAWISATAALASLTYSFIELGLGIATVIKNGRIMGSVKGVPASNPAHKIWLVFQALGDVAFAYPYTVILLEIQDTIKSPPAENKTMKKASLIAMSIVTFLYLCCGSFGYAAFGDQTPGNLLTGFGFYEPYWLIDLANVCIILQLVGCYQIFCQPIYGGVDRWCSKKYPNSGFVNNLYQLKLPLLPAFQLNPFRICFRTAYVISTTGLGILFPYFNQVIGVLGALSFWPLAIYFPVEMYFVQEKIEAWSSKWIVLKTFSLVCFLLTVVGLIGSIEGIISQKLS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0025 465 PANTHER OS05G0424000 PROTEIN-RELATED 9 464 - -
Lal6g0025 465 Pfam Transmembrane amino acid transporter protein 28 460 IPR013057 -
Lal6g0025 465 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0025 Lal-Chr6 189753 201202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0025 26 460 Organic Solute Cotransporters AT5G09220 49.315 7.50e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0025 K24917 - gmx:100786621 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0025 6 189753 201202 Lal6g0025 6 189753 201202 ECH
Lal22g0037 22 242309 246102 Lal6g0025 6 189753 201202 LSH
Lal5g0861 5 9853288 9863613 Lal6g0025 6 189753 201202 PCT
Lal6g0025 6 189753 201202 Lal5g0861 5 9853288 9863613 PCT