Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0037 ATGGGTCTGGCAAATGAGAACACCCCCCCATTGCTGAATAAAGCTCCTCATCCTGGTGCTGTGAAAAGAACAGGGGTGATAGGATCAGGAGTGTTGTCTTTGGCATGGAGCATTGGTCAACTTGGATGGGTTGCTGGTTCATTCTCAATACTCATTATTGCTTCTACTACTCTCTTCTCTTCTTTCCTTCTTTCCAATACCTTCCTTTCTTCTCTTCCTCATACCACTCCTTCCTATCTTCATCTTGTTCATTTCAATTTAGGATTAACAAATGGAAGGCTTTGTGGTCTTCTTGTGAGTATAAGCTTATATGGTTTTGGAATTGCCTTCATCATTACATCAGCTATCAGCATAAGAGCTATCCTAAATTCATATTGTAACAACATAACGGCTGGAATACCATGTGAATCTGTAGAACCAAGTTATTATATCTATATGCTGCTTTTTGGGGTTATCCAAATTGTTCTCTCACAGATACCTCATTTCCATAACATCAAATGGCTTTCTGTTCTTGCTGCAATCATGTCCTTTGCTTACTCTTTCATAGCAATAGGGCTATCCATCGTGCTAGTCTTGGAAAATGGACATGTTAAGGGTAGCATTGAAGGAATCATTGCCACTAGTGCGACAGAAAAGCTATGGCTTGTTGCTCAAGGACTCGGTGACATATCATTCTCCTATCCATTCTCAACAATTCTTATAGAAATACAGGATACTTTGAAGTCGCCGCCACCAGAAAACCAAACCATGAACAAGGCCTCAACAATATCAGTTGCCATCACAACATTCTTCTACCTTGGTTGTGCTTGTGCTGGATATGCAGCCTTCGGTAATGATACACCAGGAAACCTTCTAACAGGGTTCGGATCCTCTAGGTTTTATTGGCTTGTAGACTTTGCCAATGCTTGTATAGTGGTTCACATGGTTGGTGCATATCAGGTGTATAGCCAGCCACTTTTTGCCAATGTTGAGAATTGGTTCCATTTCAAATTCCCACATTGTGAATTCATGAATCACACGTATACAGTGAAGCTCCCCTTGGTGCCAGCTTTTGGACTAAATTTTCTGAGGCTTTCTTTCAGAACTACTTATGTTGCATCAACCACTGTGATTGCAATGATTTTTCCCTACTTCAATCAAATTTTGGGAGTTTTGGGTAGCATAACCTTTTGGCCACTAACCATATACTTTCCAGTGGAAATGTACTTGAATCAGTCCAGTACTCAAGCGTGGACTATTAAGTGGGTCATGCTTAGGACTTTCAGCATTTTTGGCTCAATGTTGGGATTGCTCACTCTCATAGGATCCATTAAAGGAATAGTAACTGAAAAAATAAGCTGA 1341 0.4049 MGLANENTPPLLNKAPHPGAVKRTGVIGSGVLSLAWSIGQLGWVAGSFSILIIASTTLFSSFLLSNTFLSSLPHTTPSYLHLVHFNLGLTNGRLCGLLVSISLYGFGIAFIITSAISIRAILNSYCNNITAGIPCESVEPSYYIYMLLFGVIQIVLSQIPHFHNIKWLSVLAAIMSFAYSFIAIGLSIVLVLENGHVKGSIEGIIATSATEKLWLVAQGLGDISFSYPFSTILIEIQDTLKSPPPENQTMNKASTISVAITTFFYLGCACAGYAAFGNDTPGNLLTGFGSSRFYWLVDFANACIVVHMVGAYQVYSQPLFANVENWFHFKFPHCEFMNHTYTVKLPLVPAFGLNFLRLSFRTTYVASTTVIAMIFPYFNQILGVLGSITFWPLTIYFPVEMYLNQSSTQAWTIKWVMLRTFSIFGSMLGLLTLIGSIKGIVTEKIS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0037 446 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 23 445 - -
Lal22g0037 446 Pfam Transmembrane amino acid transporter protein 24 441 IPR013057 -
Lal22g0037 446 PANTHER OS05G0424000 PROTEIN-RELATED 23 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0037 Lal-Chr22 242309 246102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0037 24 443 Organic Solute Cotransporters AT5G63850 46.262 2.40e-132 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0037 K24917 - gmx:100809376 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0037 22 242309 246102 Lal22g0037 22 242309 246102 ECH
Lal22g0037 22 242309 246102 Lal6g0025 6 189753 201202 LSH
Lal5g0861 5 9853288 9863613 Lal22g0037 22 242309 246102 PCT
Lal22g0037 22 242309 246102 Lal5g0861 5 9853288 9863613 PCT