Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0861 ATGTCAGAAACTGCTTCTGCAACTGACAGCACCCCATTTTTGCAGACCCAATATTCTGATTACCATCAATTTGAGAGAACTGGGACAGTATGGACAGCAGTGGCACACATAGTAACAGGGGTGATAGGGTCAGGAGTGTTGTCATTGGCATGGAGCATTGCACAACTTGGATGGATTGGAGGTCCATTGGCAATGCTTCTATTTGCTTCAATTACTCTCTTCACTTCTTTCCTTCTCAGTGATACTTACCGTTCTCCAGATCCTGAAAATGGTCCTACTAGAAGTTCCTCTTACCTTGATGCTGTTAATTTGCATAAGGGTGAAGGGAATGGAAGGCTCTGTGGAGTTTTTGTGAATGTAAGCTTATATGGTTTTGGAATTGCCTATATCATTACTGCAGCTATAAGCATGAGTTCAATCCAAAAATCAATCATTTATCGAGGCGTAGGGAGTGAGCCGACATCTGAAGCTGGGGATGCATATAACATGCTTATTTTTGGGGTTATCCAAATTGTTCTCTCACAGATACCCAACTTCCATAACATTCAATGGCTGTCAATCGTTGCGGCAATTATGTCCTTGGGTTATGCTTTCACAGGAATGGGGCTTGCCGTCGTAAAAGTTGCAGAAAATGGACATGTTGAGGGTAGCACTAAAGGAATCCCCACTTCAAGTGAAATGGCCAAATTTTGGCTGGTTGCTCAAGCGCTTGGTGACATCGCGTTCTCGTATCCATTCTCGGTAATTCTTATAGAAATACAGGATACTTTGAAGTCACCTCCACCAGAAAACGTAACGATGAGAAGGGCTTCAACAATATCAGTCATTATCACAACATTTTTCTACCTTTGTTGTGGTTGTGCTGGATATGCAGCCTTTGGTAATGATACACCAGGAAACCTTCTAACAGGGTTTGCACAATCTAAGCCTCATTGGCTTGTAGACTTTGCTAATGTTTGCATAGTGATTCACCTAGTTGGTGCATATCAGGTGTATAGCCAGCCACTTTTTGCCAATTTTGAAAATTGGCTTCGATTCAAGTACGCAGACAGCGAATTTGTGAATCACGTATACCCCTTGCACGTCCCATTGCTGCCAGCTTTTGAACTGAATTTTCTTAGGCTCTCTTTTCGAACTGCCTATGTTGCATCAACGATTATGATTGCGATGCTCTTCCCGTACTTCAATCAGATTTTGGGAGTTCTGGGTGGCATAATCTTTTGGCCATTAACCATATATTTTCCAGTGGAAATGTACTTGAGTAAGTGCAATATTGAAGCATGGACAGCTCAATGGGTAATGCTTAGAACTTTCAGCATTATTTGCTTCTTGGTGGGAATGTTCACTCTCATTGGATCCATTGAAGGGATAGTAACTGCAAAAATAGGTTGA 1392 0.4195 MSETASATDSTPFLQTQYSDYHQFERTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWIGGPLAMLLFASITLFTSFLLSDTYRSPDPENGPTRSSSYLDAVNLHKGEGNGRLCGVFVNVSLYGFGIAYIITAAISMSSIQKSIIYRGVGSEPTSEAGDAYNMLIFGVIQIVLSQIPNFHNIQWLSIVAAIMSLGYAFTGMGLAVVKVAENGHVEGSTKGIPTSSEMAKFWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENVTMRRASTISVIITTFFYLCCGCAGYAAFGNDTPGNLLTGFAQSKPHWLVDFANVCIVIHLVGAYQVYSQPLFANFENWLRFKYADSEFVNHVYPLHVPLLPAFELNFLRLSFRTAYVASTIMIAMLFPYFNQILGVLGGIIFWPLTIYFPVEMYLSKCNIEAWTAQWVMLRTFSIICFLVGMFTLIGSIEGIVTAKIG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0861 463 Pfam Transmembrane amino acid transporter protein 26 458 IPR013057 -
Lal5g0861 463 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 9 462 - -
Lal5g0861 463 PANTHER OS05G0424000 PROTEIN-RELATED 9 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0861 Lal-Chr5 9853288 9863613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0861 18 458 Organic Solute Cotransporters AT5G09220 47.865 5.87e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0861 K24917 - gmx:100801302 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0861 5 9853288 9863613 Lal22g0037 22 242309 246102 PCT
Lal5g0861 5 9853288 9863613 Lal6g0025 6 189753 201202 PCT
Lal22g0037 22 242309 246102 Lal5g0861 5 9853288 9863613 PCT
Lal6g0025 6 189753 201202 Lal5g0861 5 9853288 9863613 PCT