Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1163 ATGAAATCCCCAATCAATGTTGATTTTTTAAGAACACCTTTCACTCTCAAAATCATCGCTTTCTTCTTCCTTTCCATTACTCTCTTCTACTTCGGTTACAATTGGTCCAATAACTACCACCAACTCATTTTTTTCTCCTCTTCCCAAAACCCTAATCACGTTGTTTCAATTTCCCCCAATTTCAACAAATCCTTCAATATCTCCCCCACCATCGATCACGATCAACCGCCTCCAGTGGATTCGATTCATAAATTTGGGATCTTGAATAAGAATGGTACGATGTCTGATGAATTCGAAGTTGGGGGTTTTAGTGGTGATGATTGGGTTAATGAGACACAAAAAGTTGAAGATTCTTCTGTTAAATTTGTGATCCAGAAGTTTGGGTTATGTTCGAGGAATATGAGTGAGTATATACCTTGTTTGGATAATGTAGATGCGATTCGGAAGCTGAAATCGACGGAGAAAGGGGAAAGGTTTGAACGGCATTGTCCAGAAAAGGGTCAAGGGTTGAATTGCTTGGTTCCAACGCCGTTAGGGTATCGTAGCCCAATTCAATGGCCTAAAAGCAGAGATGAGGTGTGGTACAGTAATGTTCCTCACACTCGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGATTTCCAGAGACAAGGACAAGTTTAAATTTCCAGGAGGCGGAACACAATTTATACATGGGGCAGATGAATACTTGGACCATATTTCCAGGATGATTCCTGAAATTACATTTGGTCAGCATATACGTGTTGTTCTTGATATCGGCTGTGGTGTAGCTAGTTTTGGTGCATACTTACTGTCATGCAATGTCCTCACAATGTCCGTAGCTCCTAAGGATGTTCATGAGAATCAGATCCAATTTGCTCTCGAGCGTGGTGTACCAGCAATGGCAGCAGCATTTGCTACTAGACGTTTATTATATCCAAGCCAAGCTTTTGACTTGATGCATTGTTCGCGCTGTAGAATTAATTGGACTAGAGATGATGGAATATTGCTGCTTGAAGTTAATAGGATGCTAAGAGCCGGAGGTTACTTTGTCTGGGCTGCCCAGCCAGTTTATAAGCACGAGGAAATTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACTACTCGACTTTGCTGGAAGTTTCTGAAAAGAGATGGGTACATTGCTATATGGCAGAAACCTTTTGACAATAGCTGTTATCTAAATCGTGAGGCAGGAACTAAACCTCCACTATGTGACTCAAGTGATGACCCTGACAATGTTTGGTATGTTGATCTGAAAGCATGCATCTCTCAGTTGTCTAAGAACGGAAATGGAGCAAATATTACCAGATGGCCTGCACGTTTGCAAACACCACCCGATAGGCTTCAAAATATAAAAATGGATGCTCTTATCTCCAGAAATGAGTTATTCAAGGCAGAATCAAAATACTGGGATGACATAATAGATGGTTATGTTCGTTTTTTACGGTGGAAGGAAATGAGATTACGGAATGTTATGGACATGCGGGCTGGCTTTGGAGGATTCGCAGCAGCATTGATTAATCAGAATCTTAACAGCTGGGTTATGAACGTTGTTCCTGTTAGTGGCCCAAACACCTTGCCTGTTATATATGACCGTGGTTTAATTGGAGTTATGCATGACTGGTGTGAAGCATTTGACACCTACCCAAGAACCTACGATTTATTGCATGCAGCAAACCTTCTTTCTGTTGAGAGGAAAAGATGCAACGTCTCATCAATTATGCTCGAGATGGATCGGATACTAAGACCTGGTGGACGGGCATACATCCAAGATTCTCTTGAAATCATGGATGAACTTCAAGAAATTGGCAAGGCAATTGGCTGGCAGGTGACATTGCGCGAGACTGCTGATGGGCCTCATGCACGTTATAGGGTCTTGGTCTGTGATAAGCACCTGCTACATGCATGA 1935 0.4186 MKSPINVDFLRTPFTLKIIAFFFLSITLFYFGYNWSNNYHQLIFFSSSQNPNHVVSISPNFNKSFNISPTIDHDQPPPVDSIHKFGILNKNGTMSDEFEVGGFSGDDWVNETQKVEDSSVKFVIQKFGLCSRNMSEYIPCLDNVDAIRKLKSTEKGERFERHCPEKGQGLNCLVPTPLGYRSPIQWPKSRDEVWYSNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGADEYLDHISRMIPEITFGQHIRVVLDIGCGVASFGAYLLSCNVLTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLMHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEILEEQWEEMLNLTTRLCWKFLKRDGYIAIWQKPFDNSCYLNREAGTKPPLCDSSDDPDNVWYVDLKACISQLSKNGNGANITRWPARLQTPPDRLQNIKMDALISRNELFKAESKYWDDIIDGYVRFLRWKEMRLRNVMDMRAGFGGFAAALINQNLNSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEAFDTYPRTYDLLHAANLLSVERKRCNVSSIMLEMDRILRPGGRAYIQDSLEIMDELQEIGKAIGWQVTLRETADGPHARYRVLVCDKHLLHA 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1163 644 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 160 371 IPR029063 -
Lal5g1163 644 PANTHER METHYLTRANSFERASE PMT12-RELATED 16 642 - -
Lal5g1163 644 Gene3D Vaccinia Virus protein VP39 233 396 IPR029063 -
Lal5g1163 644 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 136 639 IPR004159 GO:0008168
Lal5g1163 644 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 475 624 IPR029063 -
Lal5g1163 644 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 16 642 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1163 Lal-Chr5 14342611 14350529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1163 - - gmx:100800414 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1163 5 14342611 14350529 Lal5g1163 5 14342611 14350529 ECH
Lal3g0554 3 4179173 4184987 Lal5g1163 5 14342611 14350529 LSH
Lal5g1163 5 14342611 14350529 Lal18g1340 18 15845590 15851040 LSH
Lal5g1163 5 14342611 14350529 Lal18g1340 18 15845590 15851040 PCT
Lal5g1163 5 14342611 14350529 Lal6g0269 6 1753237 1760473 PCT
Lal18g1340 18 15845590 15851040 Lal5g1163 5 14342611 14350529 PCT
Lal6g0269 6 1753237 1760473 Lal5g1163 5 14342611 14350529 PCT