Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0554 ATGATTTCTCCAATCAATGTAGATTTTGTAAGAACCCCATTCACTCTCAAAATCGTTGCTTTCTTCTTCCTCTCCATCACTTTCTTCTACTTCGGTTCCCACTGGTTCCACGGTTTCAACCAACTCATCTTTTTCTCCGATTCCCAATCCCTTAACCAAATTGTAACCCTTTCCCCTAATTACAACAAATCCTTCAATATCTCCTCCCTCATCGATTACCACCCACCACCAGTTGCGGCGGCGGCGGCGCCTTATCCGGTTGTACCACCGGTGGTGGCAGTGACTAATAAAGTTTATGGTTCTTCAGATTCTGATTATGTGATCAAGAAGTTTGAGGTGTGTCCGTTGAATATGAGTGAGTATATACCGTGTTTGGATAATATAGATGGGATTCGGAAGTTGAAATCAGTGGAGAAAGGGGAAAAGTTTGAACGGCATTGTCCGGAGAAAGGTGGAGGATTGAAGTGTTTGGTTCCTCCGCCCAAAGGGTACCGTACTCCTATTCTATGGCCCAGAAGCAGAGATGAGGTGTGGTATAACAATGTTCCTCACACTCGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGATTACCAGAGACAAAGACAAGTTTAAGTTTCCAGGAGGTGGTACACAATTTATACACGGGGCAGATGAATACTTGGACCATATTTCCAGGATGATTCCTGAAATTACATTTGGTCAGCATATACGAGTTGTTCTTGATGTTGGCTGTGGTGTAGCTAGTTTTGGTGCATACTTACTTTCACGGAATGTCCTCACCATGTCCGTTGCTCCTAAGGATGTTCATGAGAATCAGATCCAATTTGCTCTCGAGCGTGGTGTACCAGCAATGGCAGCAGCATTTGCTACTAGACGTTTATTATATCCAAGCCAAGCTTTTGACTTGATGCATTGTTCGCGCTGCAGAATTAATTGGACTCGAGATGATGGAATATTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGGGGTTACTTTGTCTGGGCTGCCCAGCCAGTTTATAAACACGGGGAAGTTTTACAAGAACAATGGGAAGAGATGCTTAATCTTACTACCCGACTTTGCTGGAAGTTTCTGAAAAAAGATGGGTACGTTGCAATATGGCAGAAACCTTTTGACAATAGCTGTTATATAAATCGTGAGGCGGGAACTAAACCTCCACCGTGTGACTCAAGTGATGACCCTGACAATGTTTGGTATGTTGATCTGAAAGCATGCATCTCTTGGTTGCCTGAGAACAGAAACAGTGCAAATGTTACCAGGTGGCCTGCACGTTTACAAAGTCCACCCGATAGACTTCAAAGTATAAAAATGGATGCTTTTATGTCCAGGGATGAGCTATTTAAGACAGAATCAAAATACTGGGATGGGATAATAGATAGCTATGTTAGTTCTTTAGATTGGAAGAAATTAACATTACGAAATGTTATGGACATGCAAGCTGGCTTTGGAGGATTCGCAGCAGCATTGATTAATCAGAACCTTAGCAGCTGGGTTATGAACGTTGTTCCTGTTAGTGGCCCAAACACCTTGCCAGTTATATATGACCGTGGTTTAATTGGAGTTATGCATGATTGGTGTGAAGCATTTGACACCTACCCAAGAACCTACGATTTACTGCATGCAGCAAACCTGCTTTCTGTTGAGAGGAAAAGATGCAATCTCTCATCAATTATGCTCGAGATGGATCGGATTCTAAGACCTTTTGGAAGGGCATACATCCGGGATTCTCTAGAAATCATGGATGAACTTCAAGAGATCGCCAAGGCAATGGGCTGGCACGTGACATTGCGCGAGACAGCTGAGGGACCCTATGCACGTGACAGAGTCCTGGTTTGTGATAAGAACCTGCTAGGTGCATGA 1887 0.4351 MISPINVDFVRTPFTLKIVAFFFLSITFFYFGSHWFHGFNQLIFFSDSQSLNQIVTLSPNYNKSFNISSLIDYHPPPVAAAAAPYPVVPPVVAVTNKVYGSSDSDYVIKKFEVCPLNMSEYIPCLDNIDGIRKLKSVEKGEKFERHCPEKGGGLKCLVPPPKGYRTPILWPRSRDEVWYNNVPHTRLVEDKGGQNWITRDKDKFKFPGGGTQFIHGADEYLDHISRMIPEITFGQHIRVVLDVGCGVASFGAYLLSRNVLTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLMHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHGEVLQEQWEEMLNLTTRLCWKFLKKDGYVAIWQKPFDNSCYINREAGTKPPPCDSSDDPDNVWYVDLKACISWLPENRNSANVTRWPARLQSPPDRLQSIKMDAFMSRDELFKTESKYWDGIIDSYVSSLDWKKLTLRNVMDMQAGFGGFAAALINQNLSSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEAFDTYPRTYDLLHAANLLSVERKRCNLSSIMLEMDRILRPFGRAYIRDSLEIMDELQEIAKAMGWHVTLRETAEGPYARDRVLVCDKNLLGA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0554 628 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 120 623 IPR004159 GO:0008168
Lal3g0554 628 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 450 604 IPR029063 -
Lal3g0554 628 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 360 IPR029063 -
Lal3g0554 628 Gene3D Vaccinia Virus protein VP39 217 381 IPR029063 -
Lal3g0554 628 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 107 625 IPR004159 GO:0008168
Lal3g0554 628 PANTHER METHYLTRANSFERASE PMT12-RELATED 107 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0554 Lal-Chr3 4179173 4184987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0554 - - gmx:100800414 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0554 3 4179173 4184987 Lal3g0554 3 4179173 4184987 ECH
Lal3g0554 3 4179173 4184987 Lal5g1163 5 14342611 14350529 LSH
Lal3g0554 3 4179173 4184987 Lal18g1340 18 15845590 15851040 LSH
Lal3g0554 3 4179173 4184987 Lal18g1340 18 15845590 15851040 PCT
Lal3g0554 3 4179173 4184987 Lal6g0269 6 1753237 1760473 PCT
Lal18g1340 18 15845590 15851040 Lal3g0554 3 4179173 4184987 PCT
Lal6g0269 6 1753237 1760473 Lal3g0554 3 4179173 4184987 PCT