Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1340 ATGAAACCCCATTTTCTCCAAACACCCATTTTCCTCAAAATCACTGCTTTCTTTTTCGTCGCAGTAACTTTCTTCTTCTTCGGTAAACAATGGTCTCAATCCGACGGTTACAATCACCTCATCTTCTTCACCACTACAACAACTGTTTCATCCCCTCAGGTTTTCATTTCCCCCAATTTTAACCTTTCTTTCAATGACTCTGCCATGATTGCCCAAATTGAAACCCTAGAACCACCGCTACCGTCATTTTCACCGCCTCCTCCGGCGCCGGTGGATTTGGTTCAGAAATTTGGGATCGTGAACGAGAATGGGACGATGTCTGAGGAGTTCGAGATTGGGGAATTTGATCCGGATATAGTGGATGGTGATAGTGACAACGAGACCAGAATTGATATTCCTGCAATGCCTAATGATCCGAAATTCGCGATCAAGAGGTTTGGGGTTTGCCCTAGCGCTATGAGTGAGTATATACCTTGTTTGGATAATGCAGAGGCGATTCGGAATCTGGAATCTACGGAGAGAGGGGAGAGGTTTGAGCGTCATTGTCCTTCTCAGGGGAAAGGGTTGGATTGTGTTGTTCCTCCGCCTAAAGGGTACCGTTCTCCAATTCCATGGCCGAAAAGCCGTGACGAGGTGTGGTACAATAATGTTCCTCACACTCGGCTTGTTGATGATAAAGGGGGTCAAAACTGGATTTCCAAAGACAAAGATAAGTTTAAATTTCCAGGGGGAGGTACCCAGTTTATACATGGAGCTGATCAGTACTTGGACCATATTTCTAAGATGGTTCCTGAAATTACGTTCGGTCAGCATATAAGAGCTGCTCTTGATGTTGGCTGTGGCGTAGCTAGTTTTGGTGCATACTTATTGTCAAGAAATGTCATCACTATGTCTGTTGCTCCCAAGGACGTTCATGAGAATCAGATCCAATTTGCTCTTGAGCGTGGTGTGCCAGCGATGGTGGCTGCATTTGCAACTAGACGTTTATTATATCCAAGCCAAGCTTTTGACTTGATACATTGTTCGCGCTGTAGAATTAATTGGACTCGAGATGATGGTATTTTGCTACTTGAAGTTAATAGGATTCTAAGGGCAGGAGGGTACTTTGTCTGGGCTGCTCAACCAGTTTATAAGCACGAGGAAGCTTTAGAAGAACAATGGGAAGAGATGGTTAATCTTACTACTCGTCTATGCTGGAAGTTTTTGAAAAAAGATGGGTACGTTGCAATATGGCAGAAACCTTCCGACAATAGCTGCTATCTAAACCGTGAGGCACAAATAAAACCACCACTATGCGACCCAAGTGATGATCCAGACAATGTTTGGTATGTTAATCTAAAAGCATGCATCTCTCGATTGCCTGAGAATGGATATGGAGCAAATGTTACCAGATGGCCTGCACGTTTGCAAACCCCATCTGATAGGCTTCAAAGCATAAAAATTGATGCTTTCATATCCAGAAAAGAGCTCTTTAAGGCTGAATCAAAATACTGGAATGAGATAATAGAAGGCTATGTACGGGCATTACACTGGAAGAAGATGAAATTAAGAAATGTTATGGACATGAGAGCTGGTTTTGGAGGATTTGCGGCTGCATTGATTGATCACAAGCTTGACAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGCCCAAACACCTTGCCTGTTATATTTGACCGTGGGCTGATTGGAGTTATGCATGACTGGTGTGAACCATTTGACACCTACCCAAGAACTTATGATTTACTGCATGCTGCTAACCTGCTTTCTGTTGAGAAGAAAAGATGTAATGTGTCATCAATTATGCTCGAGATGGATCGAATACTAAGGCCTGGTGGACGGGTATACATCCGTGATTCTCTTGCTATCATGGATGAGCTTGTAGAGATTGGGAAGGCTATGGGCTGGCAAGTGACATTGCGAGATACAGCTGAGGGTCCTCATGCAAGTTATAGGGTATTGGTTTGTGATAAGCACCTACTAAAGGTTTGA 1992 0.4357 MKPHFLQTPIFLKITAFFFVAVTFFFFGKQWSQSDGYNHLIFFTTTTTVSSPQVFISPNFNLSFNDSAMIAQIETLEPPLPSFSPPPPAPVDLVQKFGIVNENGTMSEEFEIGEFDPDIVDGDSDNETRIDIPAMPNDPKFAIKRFGVCPSAMSEYIPCLDNAEAIRNLESTERGERFERHCPSQGKGLDCVVPPPKGYRSPIPWPKSRDEVWYNNVPHTRLVDDKGGQNWISKDKDKFKFPGGGTQFIHGADQYLDHISKMVPEITFGQHIRAALDVGCGVASFGAYLLSRNVITMSVAPKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRILRAGGYFVWAAQPVYKHEEALEEQWEEMVNLTTRLCWKFLKKDGYVAIWQKPSDNSCYLNREAQIKPPLCDPSDDPDNVWYVNLKACISRLPENGYGANVTRWPARLQTPSDRLQSIKIDAFISRKELFKAESKYWNEIIEGYVRALHWKKMKLRNVMDMRAGFGGFAAALIDHKLDSWVMNVVPVSGPNTLPVIFDRGLIGVMHDWCEPFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEMDRILRPGGRVYIRDSLAIMDELVEIGKAMGWQVTLRDTAEGPHASYRVLVCDKHLLKV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1340 663 PANTHER METHYLTRANSFERASE PMT12-RELATED 7 661 - -
Lal18g1340 663 Gene3D Vaccinia Virus protein VP39 253 418 IPR029063 -
Lal18g1340 663 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 7 661 IPR004159 GO:0008168
Lal18g1340 663 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 179 393 IPR029063 -
Lal18g1340 663 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 493 629 IPR029063 -
Lal18g1340 663 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 155 658 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1340 Lal-Chr18 15845590 15851040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1340 - - lang:109340023 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1340 18 15845590 15851040 Lal18g1340 18 15845590 15851040 ECH
Lal3g0554 3 4179173 4184987 Lal18g1340 18 15845590 15851040 LSH
Lal5g1163 5 14342611 14350529 Lal18g1340 18 15845590 15851040 LSH
Lal18g1340 18 15845590 15851040 Lal6g0269 6 1753237 1760473 LSH
Lal3g0554 3 4179173 4184987 Lal18g1340 18 15845590 15851040 PCT
Lal5g1163 5 14342611 14350529 Lal18g1340 18 15845590 15851040 PCT
Lal18g1340 18 15845590 15851040 Lal18g1340 18 15845590 15851040 PCT
Lal18g1340 18 15845590 15851040 Lal6g0269 6 1753237 1760473 PCT
Lal18g1340 18 15845590 15851040 Lal3g0554 3 4179173 4184987 PCT
Lal18g1340 18 15845590 15851040 Lal5g1163 5 14342611 14350529 PCT
Lal6g0269 6 1753237 1760473 Lal18g1340 18 15845590 15851040 PCT