Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1533 ATGATGTTGTCAAAAGCTGAAGCTGGTAAGAAGAATGATTCTAGTAACCAGAAGAAGTTGTCCAAAGATGTTGAAACTGTAAACAAAGCTATGTTATTGGACAGAAGTTCTTCAAGAAAACCAACATCTACTGCAATTTCTCGATCTAAATCCACTTTGAAACCTCAGTTGCCTTATCCAAAACCGAGGTCCAAAGGTGGTGGTGGTGGTAGTAGTAGTAGCAGTAGCAGCAGCAGCAGCATCAGTAGGAATGTTGATGATAATTTGCAGAGCGATAGGAAGTCCATATGGAATTGGAAGCCATTGAAGGCCCTTTCACACATCCGACATAAGAGGTTCAATTGTTGTTTTTACCTCCAAGTCCATTTGATTGAAGGGTTGCCTTCCAATTTTGATGATGCTAGCCTTAGTGTGTCTTGGAAGAGGCGAGATGGTGTTTTGGTGACCCGTCCGTCCAAGGTGGTTCAAGGCGTTGCTGAGTTTGAAGATAAGTTGATTTACACTTGTTCAGTGTATGGCAGTAGGGGTGGACCTCACCATTCGGCTAAGTATGAAGCAAAACATTTTTTGCTCTATGCTTCTCTTCTCAGTGCACCAGAGCTTGATTTGGGGAAGCATCGGGTTGACCTCACACGGCTGCTTCCTCTCACTCTGGAGGATCTTGAAGAGGGGAAGATCTCAGGGAAATGGACTACGAGTTTTAGATTATCAGGAATGGCTAAGGGTGGTGTAATGAATGTTAGTTTTGGGTATATGGTGGTTGGCGATAACACTAATGCTACTAGAGACAGCCCCAATGCTCCTAATGCTTTGAGTTTGAGGCAGAATAGTATGCCTTTGATGAAACCAGATGTTAAACGCAGACAGCTTGATGGAAGCAGCAAGTTGAAGGCTATCAGAAGTTGGTCAACCAGTCAGTTTGATGAGGTAAAGGATCTTCATGAGGTTTCGCCGATATCAAAGTCAGCACTAAACAGCTTAATAGATGTCTTATACAAAAAAATTGATGTAGAAAAGGCATGGAGTCCTTCGAACAGTGAACCTGAGTTTGATGTGTTTACCAAAAACCTTGACCAAATCAAACCAGATGCTGTTTCTTCATCTGATCTTTGGAAAGAAAACCCTGAAGAGCTTGTGGGCGATGATGGAAATACATGTCCAGTGCACGACAAACATGAACTGGATTTGTTCCAAGAAAAACTGGAGATGGTTAAACCAGATGAGTATCCTTTACCTGATTCTGGAAAAGATAACCGTGAATGTTGTCAAGGTAATGAATTTTTTGTTGTTGATAAGGGCATAGAATTGTCACTAGATGATGAACCTGTTAAACTAGAGGAATTCATCATAAAGGCTCCTGAAGATACTGCGGCAAGAAATGGGACATATGCCCTTGTTACTGCAGGTATACAAGTATCTTCTGAAGAAAGTGTTAAACATGATTCCCTGGATGAGGTAAACGGTAATAGTTCTCGGGATCAAGCTGTGGTGAATGAATTTTCTTGCAAAGAGGATGATTCGTACTTGGAAGAACTGCTCCTGCGAGAGTTTGAATCAGCTATAAATAATTTCTCAGATTTGATGACAGTGGCACCAGAATCTCCTAAAATCATGGATGCCAAATCTATATACGAGACGAGAAAGTCACATAGCTTTGATGATGTTACAGAGTCAGTTACCAGTGAATTTTTAAGCATGGTAGGCGTAGACCACAGTCCCATAGGGTTGAGTTCTGAAAATGAGCCTGAATCTCCAAGAGAGCTCCTCTTAAGACAATTTGAGATGGAGGCTCAGGAAGGGGGATTTTCTTTGTTTAATTTTGACATTGACTATGATAACAAAGCAGATGGTGGCGATGAAGCTTCTATTGGATCCGAGCAGTGGAAATTCTCTGAGGGTATTAAGTCATCATCCTTGGTGCAAGCTATGCAGGAGGAGCATCCAGTTGAATCTCATGATGTCAAGAGCAAACAGAGGGCTCAGATGCTAGAAGACTTGGAAACGGAAGCCTTAATGCGTGAATGGGGTTTAAATGAGAAAGCTTTTCATCATTCTCCACCAAAAGGTTATGCTGGTTTTGAAAGTCCAATTCAGTTACCCCCTGAAGAGACTCCTACATTGCCTCCTCTGGCTGACAGGCTGGGCCCTTTTCTTCAGACAAAAGATGGTGGTTTTCTACGGTCTATGGATCCCTCAATTTTCAGTAATTCTAGAAGTGGTGGGAGCTTAATCATGCAGGTTTCCAGCCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGAATAATGGACGTTCTGCAGTGTTTGGCTTCAGTGGGAATCGAAAAGCTGTCAATGCAGGCAAAGGAGTTAATGCCTCTTGAAGATATCACAGGGAAGACAATGCAACAAATTGCATGGGAAGCTATACCTGCCTTAGAGGGAACAGAGAGGCAATGTCATTTGCAGCATGATTCAATTACAGGGCTAGATACTACTTTTGTGCAAAGGAAATTGAAAGGAACACGATCTGGACTAAAGCCTGATAAGATTCGTTCAAATTCAGTGAGAAACCAGACAGGCTCAGACTCAGAGTTTGTTTCATTGGAAGATCTTGCTCCATTGGCTATGAATAAAATCGAAGCACTTTCAATGGAAGGTTTGAGAATACAATCTGGGATGTCTAGGGAGGATGCACCGTCAAACATTGTCGCGCAGTCGATTGGGGATATTTCTGCTCTCCAGGGTAAGGGGATTGATATTAGCGGATCCCTTGGCCTGGAAGGAGCTGCTGGCTTACAGTTGTTGGATGTCAAAGACTGCAGCAGTAACGGAGTTGATGGGATTATGGGCCTATCATTAACGCTTGACGAATGGATGAGGCTGGATTCAGGTGAGATTGATGACATGGATAATATCAGTGAGCATACTTCCAAACTTCTTGCAGCCCATCATGCTAACTCGTTTGACTATATACGTGGGAGTTCAAGGGGCGAGAGGAAACGTAGCAAAGGCAGAAAGTGTGGTTTGCTGGGAAACAATTTCACAGTAGCATTAATGGTGCAACTTCGTGATCCACTGAGAAATTATGAGTCTGTTGGATCACCAATGCTTGCTCTTATACAAGTTGAGAGAGTGTTTGTCCCACCAAAGCCAAAAATTTACTTTAACGTGTCCGAGTTAAGGAACAAAAAATATGAGAACGAAATAGTAGGGAAGGTGGAGATGGAGGAGAACAAGAAAGAGGATAAAAGCTCTGAAGAGGAGGAAATTCCTCAGTTCAAAATTACTGAAGTTCATGTTGCAGGTCTGAAGACTGAGCCTCAAAAGAAGTTTTGGGGCAGTTCAAGCCAGCAACAGTCCGGCTCCCGTTGGTTGCTTGCTAATGGAATGGGGAAGAACAATAAATGTCCGATAATGAAGTCAAAGGCTGCAGATAAATCTAGTGCTCCGGTTACCACAAAGGTGCAGCCTGGCGACATCTTGTGGAGCCTCTCGTCTCGAATTTTCGGTACTGGAGCAAAATTGAAGAGATTGGCCACAGTAAATCCTCACAAAAGAAACCCCAATGTCATTATACCGAATGAAACCGTAAGACTTAGTTGA 3582 0.4283 MMLSKAEAGKKNDSSNQKKLSKDVETVNKAMLLDRSSSRKPTSTAISRSKSTLKPQLPYPKPRSKGGGGGSSSSSSSSSSISRNVDDNLQSDRKSIWNWKPLKALSHIRHKRFNCCFYLQVHLIEGLPSNFDDASLSVSWKRRDGVLVTRPSKVVQGVAEFEDKLIYTCSVYGSRGGPHHSAKYEAKHFLLYASLLSAPELDLGKHRVDLTRLLPLTLEDLEEGKISGKWTTSFRLSGMAKGGVMNVSFGYMVVGDNTNATRDSPNAPNALSLRQNSMPLMKPDVKRRQLDGSSKLKAIRSWSTSQFDEVKDLHEVSPISKSALNSLIDVLYKKIDVEKAWSPSNSEPEFDVFTKNLDQIKPDAVSSSDLWKENPEELVGDDGNTCPVHDKHELDLFQEKLEMVKPDEYPLPDSGKDNRECCQGNEFFVVDKGIELSLDDEPVKLEEFIIKAPEDTAARNGTYALVTAGIQVSSEESVKHDSLDEVNGNSSRDQAVVNEFSCKEDDSYLEELLLREFESAINNFSDLMTVAPESPKIMDAKSIYETRKSHSFDDVTESVTSEFLSMVGVDHSPIGLSSENEPESPRELLLRQFEMEAQEGGFSLFNFDIDYDNKADGGDEASIGSEQWKFSEGIKSSSLVQAMQEEHPVESHDVKSKQRAQMLEDLETEALMREWGLNEKAFHHSPPKGYAGFESPIQLPPEETPTLPPLADRLGPFLQTKDGGFLRSMDPSIFSNSRSGGSLIMQVSSPVVVPAEMGSGIMDVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQIAWEAIPALEGTERQCHLQHDSITGLDTTFVQRKLKGTRSGLKPDKIRSNSVRNQTGSDSEFVSLEDLAPLAMNKIEALSMEGLRIQSGMSREDAPSNIVAQSIGDISALQGKGIDISGSLGLEGAAGLQLLDVKDCSSNGVDGIMGLSLTLDEWMRLDSGEIDDMDNISEHTSKLLAAHHANSFDYIRGSSRGERKRSKGRKCGLLGNNFTVALMVQLRDPLRNYESVGSPMLALIQVERVFVPPKPKIYFNVSELRNKKYENEIVGKVEMEENKKEDKSSEEEEIPQFKITEVHVAGLKTEPQKKFWGSSSQQQSGSRWLLANGMGKNNKCPIMKSKAADKSSAPVTTKVQPGDILWSLSSRIFGTGAKLKRLATVNPHKRNPNVIIPNETVRLS 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1533 1193 MobiDBLite consensus disorder prediction 11 29 - -
Lal4g1533 1193 MobiDBLite consensus disorder prediction 31 54 - -
Lal4g1533 1193 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1192 - -
Lal4g1533 1193 SMART LysM_2 1145 1193 IPR018392 -
Lal4g1533 1193 MobiDBLite consensus disorder prediction 67 86 - -
Lal4g1533 1193 ProSiteProfiles LysM domain profile. 1144 1192 IPR018392 -
Lal4g1533 1193 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 110 225 IPR019448 -
Lal4g1533 1193 MobiDBLite consensus disorder prediction 1 86 - -
Lal4g1533 1193 Gene3D LysM domain 1135 1193 IPR036779 -
Lal4g1533 1193 ProSiteProfiles C2 NT-type domain profile. 105 253 IPR019448 -
Lal4g1533 1193 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1192 IPR039614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1533 Lal-Chr4 19430110 19434861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1533 - - mtr:MTR_2g040970 1546.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1533 4 19430110 19434861 Lal4g1533 4 19430110 19434861 ECH
Lal17g1510 17 16470702 16475498 Lal4g1533 4 19430110 19434861 LSH
Lal19g1204 19 15441801 15449939 Lal4g1533 4 19430110 19434861 PCT
Lal4g1533 4 19430110 19434861 Lal19g1204 19 15441801 15449939 PCT