Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1204 ATGTTGTCCAATTTTGATGTTGACAAGAAGAGTAGTGAAGGTTCAGATAATCAGAACAAGTTATTAAAAGATGTTCAAACTGTAAGCGAAGTTATATACCCGGACAAAATCTCTTTGAAGAATGCAGCATCTGCTGTGATTTCTCGATCTAAATTGACCAAGAAATTGCCCATGCCTGATTCGAAATCAAAGCCTAAAGCGGACAAAGAAGATAAATTGGACAAAGATAAGAAATCCATTTGGAATTGGAAGCCGTTAAAAGCCCTTAACATAAACCGTAGTCGAAGGTTTAATTGTTGTTTTTCTCTCCAAGTGCATTTGATTGAAGGGTTACCATTGACTTTCAATGATGCCAACCTTTGTGTGTACTGGAAGAGGCGGGATGAGGTTATGGTGACACCTCCGGCCAAGGTAATTCAATGCACGGCCGAGTTTGAGGAGAGGTTGATTTACACTTGCTCAATCTCTGGAAGTAGGAGTGGACCACATGGCTCTGCAAAATATGAAGCTAAGCATGTATTGCTCTATGCTTCTATGGTTGGTGCGCCAGAACTTGATTTAGGGAAGCACCGGGTAGATCTCACGAGGTTGCTTCCTCTCACACTGACAGAGCTTGAAGAGGAGAAGAGCTCGGGGAAGTGGACTACAAGTTTTAGATTATCAGGAGCAGCTAGGGGTGCCGCAATGAATGTCAGCTTTGGGTATGTGGTGGTTAGTGACAACACTAGTGCTACCAGAGACAACCATATTGCTCCCGGTGAATTGATTTTGAGGCAAAATAGTCTGGCGTCTTTGATGAAACCGGATCAGTCTGACAGGAGTGTGAGGCGTACTGAAAGTTTGCCAAGTATTATCAATCAGTATTCATATCAGAATATAGATGTGGTAAAGGATCTTCATGAGGTATTGCCACTATCAAAATCAGAATTAGCCATCTCAATAGACACCTTATATAAAAAAATTGAAGAAAAAAACACCGTTAGTCCTCTGAAAAATGAACCTGAACTTGATGTATTTACAAAAAATCTTGAGCTGATCAAACCAGATGTCTGTTCTTCATTTGATACTGGAAAAGAAAAACCAGAAGAGCATCCAGGTAATGAAGGAAAAACATGTAATCCAGGGCATGACACACCTGAATTTGATGTGTTCCAAGATAACACTGAGACAGTTAAGCCAGATGATTATCCTTCTCCTGACTCTGGAAAAGAAAAATGTGAATGTAATGGATTTTTTGTTGTTGATCAGGGCATAGAATTGTCATCAAATGAACATGTTAAACTAGACGAACCAATCACAAAGGCTCTTGCTAATGCTCATACAGTTGACCGTATCTCTACGATTAATACTGCTGGCATACAAGTATCTTTTGAAGATAGTTATAATCATGATTCCCTGTATGAGGTCGATGATAGTTCAAAAGAAAAGGATGTGGTACATGAATTTTCTTACGAAGAGGGCACCATATGCACAACAGAACTTCTCCTGAAAGAACTAGAATCAGCTTTAAATAGTGTCTCAGATTTGGAGAGTGTGGCACTTGACTCTCCTGATATTATGGAAGCCAAATCTGAATATAAGATGAGTAAGTCCCATAGCTTAGACGATGTTACAGAATCAGTTGCCAGTGAATTCTTAAGTATGCTAGGCTTAGACCATAGTCCAATGGGCTCGAGTTCTGAAAGTGAGACTGAGTCTCCAAGAGAGCGCCTTTTAAGAGAATTTGAGAAGGACACATTCTCTGAGGGCTTCTCTTTATTTAATTTTGAAATGAGCAACAAAAATGAAGCAGATGATAACTATGATGATTCTTTTGGATTTGAGCAGTGGGAATTCTCTGACAGTATTAACTCATCATCCTCGTTGCAAGATCTGCAGGAAGAGCATTTAATAGAGTCCCGGGATGTGAGGAGCAAAATGAAGGCACATATGGTAGAAGACATGGAAACAGAAGCCTTAATGCGTCAATGGGGTTTGAATGAGAAGGCTTTTCAGCATTCTCCACCAAAAGACGTTACTGGTTTTGGAAGTCCAATTCATTTACCGCCTGGAGAGTCTCACATATTACCTCCTCTGGCAGAGGGGTTAGGCCCTTTTCTTCAGACAAAAGATGGGGGGTTTCTACGGTCCATGAATCCCTCACTTTTCAGGAATGGTAAATGTGGGGGGAACTTAATCAATCAGGTTTCCCACCCCGTTGTGGTACCTGCAGAAATGGGTTCTGGAATAGTGGAGATTTTGCAGTGTTTAGCTTCAGTGGGAATTGAAAAGCTTTCTATGCAGGCAAACAAATTAATGCCTCTGGAGGATATCACAGGGAAGAATATGCAACAAATAGCATGGGAATCTATGTCAGTCTCACAGGGTACAGAAAGGCAATGCCATTTGCAGCATGATTTAGTAACAGTGCAAGATGCTACTTGTGTGCAAAGGGACTCAAAAGGAACATCATCTGGACTAAAATCTATCAAGCTTAGTCCAAGTTCAGTTGGCAACCAGACAGGCAAAGAATTTGTTTCTTTGGATGATCTTGCTCCACTGGCTATGGATAAAATTGAAGCACTTTCAGTGGAGGGTCTGAGAATACAATCTGGAATGTCGGAGGAGGATGCACCATCAAATATCATTACACAATCCATTGGAGAAATTTCAGCAATTCAGGGCAAGAGTGTTACTACTAGTGGGTCCCTTGACCTGGATGGAGCTGCTGCTTTGCAGTTGTTGGATTTAAAAGATAGCAGTGATGGCGATGATGGCATAATTGGTCTATCATTAACTCTTGATGAATGGATGAGACTGGATTCAGGTGAAATTGATGATGATATAGATAATATCAGTGAACACACTTCCAAAGTTCTAGCAGCCCATCATGCTAATAACTCTTTTGAGTTAATTCATAGCAGCTCAAAGGGAGAGAGGAAACGAGGTAAAGGCACTGCCAGGAAATGTGGTTTGCTGGGAAACAATTTCACAGCAGCATTGATGGTGCAACTTCGTGATCCTATGAGAAATTATGAGCCTGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGTATTTTTCCCACCAAAGCAAAAAATATCAAGGAGTGTGTCTGAGGTCAGGAACAATGACAATGAGGATGATGAGTGTGAAATAGTAGCGAAAGTGGAGATGAAGCAAAGCAAGAAAGAGGAGAAAAATTCTGAAGAGGATGGCATTCCTCAGTTCAGAATTACTGAAGTCCACGTTGCAGGTCTCAAGACCGAGCCTCACAAAAAGAAACTGTGGGGCACGGCAAAACAGCAACATTCCGGTTCCCGTTGGTTGCTTGCTAATGGAATGGGAAAGAGCAATAAGCATCCATTAATGAAGTCAAAGGCTGTATCTAAATCTAATTATAGTGCTCCAGTTAACACAAAGGTGCAACCTGGTGACACATTGTGGAGCATTTCGTCTCGTATTTATGGTACTGGAACAAAGTGGAAGGAATTGGCAGCACTGAATCCACATATAAGAAATCCCAATATCATTATACCTAATAATGAAACTATAAGAGTAGGTTGA 3552 0.4088 MLSNFDVDKKSSEGSDNQNKLLKDVQTVSEVIYPDKISLKNAASAVISRSKLTKKLPMPDSKSKPKADKEDKLDKDKKSIWNWKPLKALNINRSRRFNCCFSLQVHLIEGLPLTFNDANLCVYWKRRDEVMVTPPAKVIQCTAEFEERLIYTCSISGSRSGPHGSAKYEAKHVLLYASMVGAPELDLGKHRVDLTRLLPLTLTELEEEKSSGKWTTSFRLSGAARGAAMNVSFGYVVVSDNTSATRDNHIAPGELILRQNSLASLMKPDQSDRSVRRTESLPSIINQYSYQNIDVVKDLHEVLPLSKSELAISIDTLYKKIEEKNTVSPLKNEPELDVFTKNLELIKPDVCSSFDTGKEKPEEHPGNEGKTCNPGHDTPEFDVFQDNTETVKPDDYPSPDSGKEKCECNGFFVVDQGIELSSNEHVKLDEPITKALANAHTVDRISTINTAGIQVSFEDSYNHDSLYEVDDSSKEKDVVHEFSYEEGTICTTELLLKELESALNSVSDLESVALDSPDIMEAKSEYKMSKSHSLDDVTESVASEFLSMLGLDHSPMGSSSESETESPRERLLREFEKDTFSEGFSLFNFEMSNKNEADDNYDDSFGFEQWEFSDSINSSSSLQDLQEEHLIESRDVRSKMKAHMVEDMETEALMRQWGLNEKAFQHSPPKDVTGFGSPIHLPPGESHILPPLAEGLGPFLQTKDGGFLRSMNPSLFRNGKCGGNLINQVSHPVVVPAEMGSGIVEILQCLASVGIEKLSMQANKLMPLEDITGKNMQQIAWESMSVSQGTERQCHLQHDLVTVQDATCVQRDSKGTSSGLKSIKLSPSSVGNQTGKEFVSLDDLAPLAMDKIEALSVEGLRIQSGMSEEDAPSNIITQSIGEISAIQGKSVTTSGSLDLDGAAALQLLDLKDSSDGDDGIIGLSLTLDEWMRLDSGEIDDDIDNISEHTSKVLAAHHANNSFELIHSSSKGERKRGKGTARKCGLLGNNFTAALMVQLRDPMRNYEPVGTPMLALIQVERVFFPPKQKISRSVSEVRNNDNEDDECEIVAKVEMKQSKKEEKNSEEDGIPQFRITEVHVAGLKTEPHKKKLWGTAKQQHSGSRWLLANGMGKSNKHPLMKSKAVSKSNYSAPVNTKVQPGDTLWSISSRIYGTGTKWKELAALNPHIRNPNIIIPNNETIRVG 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1204 1183 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1178 IPR039614 -
Lal19g1204 1183 MobiDBLite consensus disorder prediction 55 73 - -
Lal19g1204 1183 MobiDBLite consensus disorder prediction 354 370 - -
Lal19g1204 1183 ProSiteProfiles LysM domain profile. 1133 1181 IPR018392 -
Lal19g1204 1183 Gene3D LysM domain 1135 1178 IPR036779 -
Lal19g1204 1183 CDD LysM 1136 1175 IPR018392 -
Lal19g1204 1183 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 94 234 IPR019448 -
Lal19g1204 1183 MobiDBLite consensus disorder prediction 1 21 - -
Lal19g1204 1183 Pfam LysM domain 1136 1173 IPR018392 -
Lal19g1204 1183 ProSiteProfiles C2 NT-type domain profile. 89 237 IPR019448 -
Lal19g1204 1183 MobiDBLite consensus disorder prediction 354 381 - -
Lal19g1204 1183 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1178 - -
Lal19g1204 1183 MobiDBLite consensus disorder prediction 54 73 - -
Lal19g1204 1183 SMART LysM_2 1134 1183 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1204 Lal-Chr19 15441801 15449939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1204 - - lang:109362358 1400.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1204 19 15441801 15449939 Lal19g1204 19 15441801 15449939 ECH
Lal19g1204 19 15441801 15449939 Lal17g1510 17 16470702 16475498 PCT
Lal19g1204 19 15441801 15449939 Lal4g1533 4 19430110 19434861 PCT
Lal17g1510 17 16470702 16475498 Lal19g1204 19 15441801 15449939 PCT
Lal4g1533 4 19430110 19434861 Lal19g1204 19 15441801 15449939 PCT