Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0678 ATGACAAGGTTTGTAGTTTTTGCTCTTGATAAACTATGTTCAAGGATGCCACCTGGGCAAGAACAGTTTCTAGCTATAGCAGATATTAAGGGATGGGGTTATGCAAATAGTGACATTCAAGGATACCTTAATGCTCTTACAATTTTGCAGGATTACCACCCTGAAAGATTGGGAAAATTGTTTATTGTTCATGCACCTTATATGTTTATGAAAGTATGGAAAGTTATATACCCTTTCGTTGACAACAATACAAGGAAAAATATAGTATTTGTGGAGAACAAAAACCTGAGAGAAACACTTCTAGGAGACATAGATGAGAGTCAGCTCCCTGAAATATATGGAGGCCAAATGCCATTACTCCCTCTCCAAGATTGTTGA 378 0.3704 MTRFVVFALDKLCSRMPPGQEQFLAIADIKGWGYANSDIQGYLNALTILQDYHPERLGKLFIVHAPYMFMKVWKVIYPFVDNNTRKNIVFVENKNLRETLLGDIDESQLPEIYGGQMPLLPLQDC 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0678 125 Gene3D - 1 121 IPR036865 -
Lal4g0678 125 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 1 121 IPR001251 -
Lal4g0678 125 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 2 125 - -
Lal4g0678 125 PANTHER OS03G0850700 PROTEIN 2 125 - -
Lal4g0678 125 SUPERFAMILY CRAL/TRIO domain 2 118 IPR036865 -
Lal4g0678 125 SMART sec14_4 1 118 IPR001251 -
Lal4g0678 125 Pfam CRAL/TRIO domain 2 115 IPR001251 -
Lal4g0678 125 CDD SEC14 3 116 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0678 Lal-Chr4 5292051 5293426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0678 53 110 Acyl Lipid Metabolism Gene Families AT5G47730 37.931 1.85e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0678 - - lja:Lj1g3v1409270.2 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0678 4 5292051 5293426 Lal4g0678 4 5292051 5293426 ECH
Lal17g0812 17 5938637 5941059 Lal4g0678 4 5292051 5293426 LSH
Lal14g1419 14 15439558 15441912 Lal4g0678 4 5292051 5293426 PCT
Lal4g0678 4 5292051 5293426 Lal14g1419 14 15439558 15441912 PCT