Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1419 ATGGCTAATGATGGAACTAAAGAAGGAGGAGCAATAGAGCAAGTGGTTGTAGATGATCATGGAGTAGAGAAAGATAGCACTGAGAATGAGATCACCAAAATCCATCTTATTAGACACTTTGTTGAATCACGAGATCCTTCTTCTAAGAAAGAGGATGATTTGATGTTAAGAAGATTCCTGCGTGCCCGTGATTTAGATATTGAGAAGGCTTCAACAATGTTTCTTAAGTACTTGAAATGGAGACATTCATTTGTCCCCAATGGTTCTATATCTCTGCAAGAGATTCTTAATGATCTCGCACATGATAAGGTATTTGTACAAGGACATGATAAGAGTGGTCGACCTATAGCTATTATCTTAGGTGCAAGACATTTTCAGAACAAAAATGGTCTTGAAGAATTCAAACATCTTAAGGGATGGAGATATTCAAACAGTGACGTACGAGGATACATTAGTGCTCTAAACATTTTGCAGGATTATTACCCCGAAAGATTGGGGAAGTTGCTTGTTGTCCATGCACCTTACATTTTTATGAAAGTGTGGAAAATGGTTTACCCCGTTCTTGATAACAAAACCAAGAAAAAGATAATATTCGTGGAGAGCAATAAGCTGAAGTCAACACTGATGGAAAATATAGAAGAAAGTCAACTGCCGGAGATATACGGAGGTCCTCTCCCATTAGTTCCGGTCCAACATATCTAA 702 0.3803 MANDGTKEGGAIEQVVVDDHGVEKDSTENEITKIHLIRHFVESRDPSSKKEDDLMLRRFLRARDLDIEKASTMFLKYLKWRHSFVPNGSISLQEILNDLAHDKVFVQGHDKSGRPIAIILGARHFQNKNGLEEFKHLKGWRYSNSDVRGYISALNILQDYYPERLGKLLVVHAPYIFMKVWKMVYPVLDNKTKKKIIFVESNKLKSTLMENIEESQLPEIYGGPLPLVPVQHI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1419 233 CDD SEC14 99 223 IPR001251 -
Lal14g1419 233 Gene3D - 20 136 IPR036865 -
Lal14g1419 233 SMART sec14_4 98 226 IPR001251 -
Lal14g1419 233 SUPERFAMILY CRAL/TRIO N-terminal domain 24 87 IPR036273 -
Lal14g1419 233 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 137 229 IPR001251 -
Lal14g1419 233 PANTHER OS03G0850700 PROTEIN 20 136 - -
Lal14g1419 233 PANTHER OS03G0850700 PROTEIN 136 232 - -
Lal14g1419 233 Gene3D - 137 230 IPR036865 -
Lal14g1419 233 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 20 136 - -
Lal14g1419 233 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 136 232 - -
Lal14g1419 233 Pfam CRAL/TRIO domain 137 223 IPR001251 -
Lal14g1419 233 SUPERFAMILY CRAL/TRIO domain 95 226 IPR036865 -
Lal14g1419 233 SMART CRAL_TRIO_N_2 52 77 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1419 Lal-Chr14 15439558 15441912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1419 56 218 Acyl Lipid Metabolism Gene Families AT5G47730 26.238 2.12e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1419 - - lang:109362343 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1419 14 15439558 15441912 Lal17g0812 17 5938637 5941059 ECH
Lal14g1419 14 15439558 15441912 Lal14g1419 14 15439558 15441912 ECH
Lal14g1419 14 15439558 15441912 Lal17g0812 17 5938637 5941059 PCT
Lal14g1419 14 15439558 15441912 Lal4g0678 4 5292051 5293426 PCT
Lal17g0812 17 5938637 5941059 Lal14g1419 14 15439558 15441912 PCT
Lal4g0678 4 5292051 5293426 Lal14g1419 14 15439558 15441912 PCT