Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0486 ATGCCGCGTAGCTCGAAGAACAAATCGAGCAAGCATAGTTTTCGGGATGCGAGGGATTACTCCGATCCCGAGAGAGATTCCGGCACAAAGGATCGGAAGATCAAGGACAAGAATAGCGACACCGCCGCGAAGGTGGAGAAGCGGAAGGTGGTGATGAATTCGAATTCGAAGGAGCGAGAGTATACAGATGATTACGGTGGCGGTGGTTCGTCGAAGCGGCGGAAAGACGGTGGTGGAGATAGGTGGAATGGAGGAGGTGACGACAATCGAGGCGGCGATGCGATGAAGAAGGATTCAAAGAGTAGTAGAAGGAGGGAAGAGGAGGGTGAAGAGGTGAAGAGGAGTGGCGGGAAGCATAAGGATTCGTCGGGCCGAAAGGAGAGTAGAGAAGGTGAGAGGAAATTTAAGGACGGGAGAAATGAGGAACCATTGGTTGATGATGAACAGCAGCAACAACAGCGTGCGAATAAGCAAGTGTTTGAAAATAATAATGATTCTCGGAAGATAGATGAGTTACAAAGCCTTGAAGTTGATAACCAGCTTGAGAGGCGAATTAGGAAGAGGAGGGACAACTATGATCATGGTGGAGAGCTTCAAGATGATGCTGGAGATGGTTATGATCGACATAAGAATGATACTTCCAAGGATGGAAAGAAGAAGGATGATAGGCGAAAGGATGAGAAATATAGAGACAATTATAGGGAAGAGATGGGGAGGGAGAACAAACATCGACATGTCAAGCAACGAAATGAGCGTCCTGCAAAAGATCATGCCAGCATTAGGTCGGATGACAAACATGGAAGAGGAGATAAAAATATCCTAGAATCACGACAAAAGAGAACCAAGCTTCCAGATAGTGACAGGGACCAGTATTGTGATCGTGATGGAGAAAGAGAATTGGATCATGATTTTGAATATGTTCGTGAGCGCCGCAGTGAATGTGATCGCGAGCGTGACTATGATTTTGACAGGGATCGTGAATATGACAGAGATCGAGATAGGGACTGGTATCATGATCGAGATCATGATCAAGAGCGTGACCGTCACCGTGATGGGTCACATGTGGATGATAGAAGTGTTAGAAGCAAAGAGGGTGGGACAAAGAAAAGAACTTTGGATGACCGTGATGATTATAGTGACTCTAAATCTAGAGTTTTTAAGAGCCACTATCCTGATGCTGAGAAGAGGAGTCTGAACAACAGTAAAGCTGATTCTGATATTGGCATGGGGATATCCCAACCTCGTCAAGTGCATGTAGATTCTACTGGGACTAGCAACAAACACAGGTATTCTCCTGCTTTAAATTCAGATATTGACAAGGATGAGTGTAGAAATGCAAATGCTGATCGAGACTCAACAATGGAGCAGAGAACGAAAGGCTCAAGAGAGGGTTACTCCGGGATATCAGAGAGAACTCCTAAATACAAAATAATGGAAAAACCCACTAAAATAGATGAAGGTCCTGTAGGAGACTTGTCAAGTGAAAGGTCTTCCGTTGGTAAGGCTTCCTCCATGGGCCTGATGGAAAGATCTCCTTCATCAACAAGCATTGAGCGCAGGTATGTGAATAAAAGTGTTGTTAACAGGAGTGTTGAAATCGATGAAGGTGGAAGGAGGAAAAGTATTGATGCAAGAGATGATTATAGACTTGGCCGGGAATTGACTGTAGAGAAACCACTATTGGAGGAGTCCTCACAAGCAGATTCATCTTTTTATGATAGGACTAATCTGAACAATGCATCATTCATTCCTCCCCAACCTGCTTTCAAGGCTGCACTTGATAGATCTTATATGGGTTCGTTGGAGGATGATGTCAGAGATAACTCCAATAATCGATACAGAAGAAATGGTGAATCTGGTTTTGGAAGATTGCATGGTGGCAATTCCTGGAGGGCAGTTCCAAACTGGACATCCCCTGTACCAAATGGTTTTGTTCCCTTCCCACCTGGTCCAGCTCATAGAGGTTTTCAAACAATGATGCCACAGTTTACATCTCAACCTATCTTTGGTGTTAGGCCTCCAATGGACCATGCTGGCATTCCATACCATATTGCTGATGGTGACAGGTTTCCAGGTCACTTGCGCCCACTACTTGGGTGGCAAAATATGATGGATGGTACAGGACCTGCCCATTTGCATGGGTGGGATAGCAATAATGGTATCTTCAGAGATGATCCTCACATGTATGGCGGTTCTGATTGGGACAGGAACAAGCACTCGACAAAAAGTCATGGATGGGAATCTGATTCAGAGACTTGGAAAGAACAGAATTCTGATACAAAGCAGGACCTGTCTTCCCCAGCTTGTAAAAATGAATCTGTTCCTGCCCTTGTTGACGACGGTGTAACTGATCAGACTACTAAGGTTTCTCTGGATGAACACAAGGGGGATGGATTTCATGAGAAAGCTCCTGAAACTAAGTTGGGCAGTCTCATCTCTCCAGCAAAAGTACCTTTGAACTCTTTGCCCACAACTATTCCTGAAAAGGTTCCTGATACTTCAATACAAAGTGACAGTACTTCTCTTCGCAGCCATTTCTACCTTTTGAAACTTGACATTTCGGAAGACCTGGTACTGCCGGAGTTATATGACCAGTGTATGTTTTCTCTGAATGCTGACAAGAATGCATCCATTGATGCAGATGCTAGTTCAAAACCATTCTTGAAGCAGAATGCTAGAAGAGCTCGACAGAAATATGCTGCCACTTTATCTAGGCAGGCCCCTTTTCCAGAAATTGATAATTCTGTCTTCAAGAGAGCCATAGACCTTTACAAGAAGCACAGGGTGAAACTGTCTAAAGAGGAGGAGCTAGATATTATCGCGCCATCCAACCAGATGGAAGTGGATGAGTTACTTCCTGCTTCCAGTCTGGAGAATAAGCCGGTTTCTGTTTCCGCTTCTGATGGGACTAAAGACGTGTTATTGATACCTGCAGTAGAACTGAAGAAAATTGAAGAATTGTCTCCTGCAAAGGACCATTTGGAAGAGATCAATCAACCCTTCAACCAAATGGTGCAAGATTATGATTCTACCCATTCTTTGAAGATGGACATGGCTGGTCAATATTCTATTCATGAGAACCAAGAAGAAGCTGTAGCAACTTTGTGTGAGAACGAGGACAAAGTTACTTCTGATAAGGTGAAATCAAGTGATGAAGAAGAGAATTACTCCATGTCATCCAAAAATGAAGCTAGAGTGAAATCAAGTGACGAAGAAGAGAATTACTCCATGGCATCAAAAAATGAAGCTCCATTGGCCCCCGCTTTGCCTGAAGATGATAACATGAATAGTAAAGCCAAAACTACTGGTGATGACACCAAGGTTAATCCCTTAATTTTAGAGGATGGGTCTCCCAAAGTTTGTGATGCTTTGATGCCTGGTTCAAATGAGTCTGAGTCACTAATTTTAAGCCGGATACATCATTCTCCTGAAAGTACACATTGA 3444 0.4384 MPRSSKNKSSKHSFRDARDYSDPERDSGTKDRKIKDKNSDTAAKVEKRKVVMNSNSKEREYTDDYGGGGSSKRRKDGGGDRWNGGGDDNRGGDAMKKDSKSSRRREEEGEEVKRSGGKHKDSSGRKESREGERKFKDGRNEEPLVDDEQQQQQRANKQVFENNNDSRKIDELQSLEVDNQLERRIRKRRDNYDHGGELQDDAGDGYDRHKNDTSKDGKKKDDRRKDEKYRDNYREEMGRENKHRHVKQRNERPAKDHASIRSDDKHGRGDKNILESRQKRTKLPDSDRDQYCDRDGERELDHDFEYVRERRSECDRERDYDFDRDREYDRDRDRDWYHDRDHDQERDRHRDGSHVDDRSVRSKEGGTKKRTLDDRDDYSDSKSRVFKSHYPDAEKRSLNNSKADSDIGMGISQPRQVHVDSTGTSNKHRYSPALNSDIDKDECRNANADRDSTMEQRTKGSREGYSGISERTPKYKIMEKPTKIDEGPVGDLSSERSSVGKASSMGLMERSPSSTSIERRYVNKSVVNRSVEIDEGGRRKSIDARDDYRLGRELTVEKPLLEESSQADSSFYDRTNLNNASFIPPQPAFKAALDRSYMGSLEDDVRDNSNNRYRRNGESGFGRLHGGNSWRAVPNWTSPVPNGFVPFPPGPAHRGFQTMMPQFTSQPIFGVRPPMDHAGIPYHIADGDRFPGHLRPLLGWQNMMDGTGPAHLHGWDSNNGIFRDDPHMYGGSDWDRNKHSTKSHGWESDSETWKEQNSDTKQDLSSPACKNESVPALVDDGVTDQTTKVSLDEHKGDGFHEKAPETKLGSLISPAKVPLNSLPTTIPEKVPDTSIQSDSTSLRSHFYLLKLDISEDLVLPELYDQCMFSLNADKNASIDADASSKPFLKQNARRARQKYAATLSRQAPFPEIDNSVFKRAIDLYKKHRVKLSKEEELDIIAPSNQMEVDELLPASSLENKPVSVSASDGTKDVLLIPAVELKKIEELSPAKDHLEEINQPFNQMVQDYDSTHSLKMDMAGQYSIHENQEEAVATLCENEDKVTSDKVKSSDEEENYSMSSKNEARVKSSDEEENYSMASKNEAPLAPALPEDDNMNSKAKTTGDDTKVNPLILEDGSPKVCDALMPGSNESESLILSRIHHSPESTH 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0486 1147 PANTHER OS05G0595500 PROTEIN 1 1147 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 161 244 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 433 458 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 251 401 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 415 432 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 1037 1077 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 1 516 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 733 758 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 1130 1147 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 1037 1147 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 473 490 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 9 148 - -
Lal4g0486 1147 MobiDBLite consensus disorder prediction 733 771 - -
Lal4g0486 1147 PANTHER LOW PROTEIN: ZINC FINGER CCCH DOMAIN PROTEIN 1 1147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0486 Lal-Chr4 3464561 3472315 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0486 K22909 - gmx:100814864 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0486 4 3464561 3472315 Lal4g0486 4 3464561 3472315 ECH
Lal17g0558 17 3958706 3965546 Lal4g0486 4 3464561 3472315 LSH
Lal21g0565 21 4161636 4170554 Lal4g0486 4 3464561 3472315 LSH