Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0558 ATGCCGCGAAGCTCGAAGCACAAATCGAGCAAGCATGGTTCTCGTGATGCGAGGGATTATTCTGATTCGGAGAGAGATTCCGGCGTGAAGGATCGGAAGAGCAAGGATGATAGCGCCACTGCCGCTGCGAAGGTGGAGAAGCGGAGAGTGGTGGTGGATTTGAATGTGAAGGAGGGAGAGTATTCCGATGAGTATGGCGGTGGTTCGTCGAAGCGGCGCAAGGACGGTGGAGATAGGTGGAACGGAGGAGGGGATGATGATCGTGGTGGCGAAGTGAGGAATAAGGAGTCAAAGAGTAATAGAGGGAGGGAAGAGGAGGGCGAGGAGGTTAAGAGGAGTGGTGGGAAGCATAGGGATTCGTCGATTTCGGCAAGTCGAAAAGAGAGTAGAGAAAGTGAGAGAAGGTTGAAGGATGGGCGAAGTGATGAAATTGTTGATGCTGCTGTTGATGAAGAACTGCAGCAACAGCTTGTGAATAAGCAAGTGCTTGAAAATAATAGTGATTCCAGGAAAATAGATGAGTTACGAAGCCCTGAATTTGATAACCAGCTTGAGAGGCGAATGAGAAAGAGGAGGGACAACTATGTTGATGGCGGAAAGCTTCAAGATGATGCCGGAGATGGTTATGATCGAAATAAGGATGACAATGCGAAGGATGGAAAGAAGAAGGATGATAGGCGAAAAGATGAGAAATATAGAAACAAGTATAGGGAAGACATGGACAGGGAAAACAAACATAGACATGACAAGCAACGGGATGAGCGTCCTACAAAAGATCGCACCGGCATTAGGTCGGATGATAAGCATTCAAGGGAAGAGAAAAATAGCTTAGAATCACGACATAAGAGAACTAAACTTCCAGATGGTGACAGGGACCACAGTTGTAATGGAGAAAGAGAACGCAATCGTGATTTTGAATATGTTCGTGATCGTGAGCGCCGCAGTGAACGTGATCGCGAGCGTGATTATGATTTTGACAGGGATCGTGATCATGACAGAGATCGAGACTGGGATCTTGATCAATATCATGATCGTGACCGAGACAGGGACCGTCACCGTGATGGGTCATATGTGGATGAAAGAAGTGCTAGAAGCAAAGAGGGTGGGACAAAGAAAAGAACATTGGATGACCGTGATGACTTTAGTGACTCTAAATCTAGAGGTGTTAAGAGCCACTATCCTGATGCAGAGAAGAGAAGTCTGAGCAACAGTAGAGCTGATTCTGATATTGACCGGGGAAGGTCCCAATCTCGCCAAGTACATGCAGATTCATCTGGGACTAGCAACAAATACAGATCTTCTCCTGTTTCAAATTCACGTATCGGCAAGGATGAGTTCAGTTATGCAAATGCGGAAGATCCCAAGTACAGAGACTCAACGATAGAACAGAGAACTAAAGGCTCAAGAGAAGGGTACTCCGGATTACCAGAGAGAGCACCTAAATACAAATTAATGGAAAAACCCACCAAAATAGATGAAGGTCCTGTTGGTGACTTGTCAACTGAAAGGTCTTCCGGTGCCAAGGCTTCCCCCAAAGGCCTGATGGAAAGATCTTCATCAACAAGCATTGAGCGCAGGCATGTGAACAAGAGTGGTGTTAAGAGGAACGTTGAAACCGATGAAGGTGGAAGGTGGCATAGTATTGATGCTAGAGATGATAGACTTGGCCGGGAGTTGACTCTAGAGAAATCACCGTTGGACGAGCCCTCACAACCAGATTCATCTTTTTATGGTAGGACTAGTCAGACCAATGCATCATTGATTCCTCCCCCACCTGCTTTCAGAGCTGCCCTAGATAGGCCTTATATGGGTTCGTTGGAGGATGATGTTAGAGATAACTCCAATAACCGATACAGAAGAAATGGTGAACCTGGTTTTGGAAGAGTGCATGGTGGCAATTCCTGGAGGGCAGTTCCAAACTGGACTTCTCCTGTACCAAATGGATTTGTTCCCTTCTCACCTGGTCCAGCTCATGCAGGTTTTCATACAATGATGCCACAGTTTACGTCCCAACCTATCTTTGGTGTTAGGCCTCCAATGGACCATGCTGGCATTCCTTACCATATTGCTGACAGTGACAGGTTTCCAGGTCACTTGCACCCACCGCTTGGGTGGCAAAATATGATGGATGGTTCAAGACCTGCTCATTTGCATGGGTGGGATAGCAATAATGGTATCTTCAGAGATGATCCTCACATGTATGGTGGTACTGATTGGGACAGGAACAGGCACTCAACAAATAGTCATGGATGGGAATCTGGTTCAGAGACTTGGAAAGAACATAATTCTGATTCAAAGAAGGACCTAATATCCCCAGCCTGCAAAGAAGAATCTGTTCCTACCCTGGTTAACAATGGTGTGACTGATCAGACTACTAAGATTTCTCCAGATGAACACAATCGGGATGAATTTAACAATAAATCGCCTGAAACAAAGCTGGCCAGCCTCAGTTCTCCAGCAAAAGTACCTTTGACTGCATCTGCAACTATTCTTGAAAAGGTTCAAGACACTTCGACACAAAGTGACAGTAGTTTTCTTCTCAGCCGTTTCTACCTTTTGAAACTTGACATTTCAAAAGACCTGGTATTGCCGGAGTTATATGACCAGTGTATGTATGTTCTGAATGCTGACAAGAATGAATCCACTGATGCAGATGTTAGTACAGAATCATTCTTGAAGAATGATAGGAAAGCACAACAGAAATATGCTGCCACTTTATCTAGGCAGCCTCCCTTTCCAGAAATTGATAATTCTGTCTTCCAGAGAGCCATGGACCTTTACAAGAAGCAGAGGGTGAAACTGCCTAATGAGGAGGAGTTAGGTATTATTCTGCCATCCAACCAGATGGAAGTGGATGAGTCACTTCCTACTTCCAGTCTGGAGAATAAGCAGGTTTCTGTTTCGGCTTCAGATGGAACAAAAGATATGCTAATAGTACCTGCAGTTGAACTGGAGAAAATGAATGATTTGTCTCCTGCAAAGCAGCATCTTAAAGAGATCGATCAAACCTGCAACCAGATGGAACAAGATTATGATTCTACACATTCTTTGAAGATAGACGTGGCTGGTAAATCATCTGTTAATGAGAACCAAGAAGAAGCTATAGCAGCTTTGTGTGAGAACGACGGCGAACTCACTTCTGATAAGGTGAAATCAAGTGAAGAGGAGGGTTACTCCATGGCATCCAAAAATGAAGCTCAGTTGGCCCCAGCTTTGCAGGAAGAGGGTGATAATAACTTGAATAGGGAAGCCAAAGCTACTGGTGATGAGACAAAGGTTAATCCCTTAATTTTAGAGGATGGGTCTCCCAAAGTTTGTGATAGTTTGATGCCTGGTTCAAATGAGTCTGAGTCACTAATTTTAAGCCGGATACATCATTCTCCTGAAAGTACACATTGA 3399 0.4481 MPRSSKHKSSKHGSRDARDYSDSERDSGVKDRKSKDDSATAAAKVEKRRVVVDLNVKEGEYSDEYGGGSSKRRKDGGDRWNGGGDDDRGGEVRNKESKSNRGREEEGEEVKRSGGKHRDSSISASRKESRESERRLKDGRSDEIVDAAVDEELQQQLVNKQVLENNSDSRKIDELRSPEFDNQLERRMRKRRDNYVDGGKLQDDAGDGYDRNKDDNAKDGKKKDDRRKDEKYRNKYREDMDRENKHRHDKQRDERPTKDRTGIRSDDKHSREEKNSLESRHKRTKLPDGDRDHSCNGERERNRDFEYVRDRERRSERDRERDYDFDRDRDHDRDRDWDLDQYHDRDRDRDRHRDGSYVDERSARSKEGGTKKRTLDDRDDFSDSKSRGVKSHYPDAEKRSLSNSRADSDIDRGRSQSRQVHADSSGTSNKYRSSPVSNSRIGKDEFSYANAEDPKYRDSTIEQRTKGSREGYSGLPERAPKYKLMEKPTKIDEGPVGDLSTERSSGAKASPKGLMERSSSTSIERRHVNKSGVKRNVETDEGGRWHSIDARDDRLGRELTLEKSPLDEPSQPDSSFYGRTSQTNASLIPPPPAFRAALDRPYMGSLEDDVRDNSNNRYRRNGEPGFGRVHGGNSWRAVPNWTSPVPNGFVPFSPGPAHAGFHTMMPQFTSQPIFGVRPPMDHAGIPYHIADSDRFPGHLHPPLGWQNMMDGSRPAHLHGWDSNNGIFRDDPHMYGGTDWDRNRHSTNSHGWESGSETWKEHNSDSKKDLISPACKEESVPTLVNNGVTDQTTKISPDEHNRDEFNNKSPETKLASLSSPAKVPLTASATILEKVQDTSTQSDSSFLLSRFYLLKLDISKDLVLPELYDQCMYVLNADKNESTDADVSTESFLKNDRKAQQKYAATLSRQPPFPEIDNSVFQRAMDLYKKQRVKLPNEEELGIILPSNQMEVDESLPTSSLENKQVSVSASDGTKDMLIVPAVELEKMNDLSPAKQHLKEIDQTCNQMEQDYDSTHSLKIDVAGKSSVNENQEEAIAALCENDGELTSDKVKSSEEEGYSMASKNEAQLAPALQEEGDNNLNREAKATGDETKVNPLILEDGSPKVCDSLMPGSNESESLILSRIHHSPESTH 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0558 1132 MobiDBLite consensus disorder prediction 1109 1132 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 567 588 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 480 497 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 1 591 - -
Lal17g0558 1132 PANTHER OS05G0595500 PROTEIN 1 1132 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 12 147 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 787 818 - -
Lal17g0558 1132 PANTHER LOW PROTEIN: ZINC FINGER CCCH DOMAIN PROTEIN 1 1132 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 746 766 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 1074 1132 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 446 465 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 166 418 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 419 444 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 519 564 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 606 625 - -
Lal17g0558 1132 MobiDBLite consensus disorder prediction 794 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0558 Lal-Chr17 3958706 3965546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0558 K22909 - gmx:100810264 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0558 17 3958706 3965546 Lal21g0565 21 4161636 4170554 LSH
Lal17g0558 17 3958706 3965546 Lal4g0486 4 3464561 3472315 LSH