Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0565 ATGACGAGAAGCTCGAAGCATAAATCGAGCAAGCATAGTTCTCGTGATGCGAGGGAGTACTCCGATTCCGAGAGAGATTCCGGCGTGAAATATCGGAAGAGCAAGGAGGAGAGCGCCGCCGCCGCAAAAGTGGAGAAGCGGAGGGCGGTGGATTCGAATTCGAAGGAGGGAGAGTATTCCGATGATTATGGCGGCGGTTCGTCGAAGCGGCGCAAGGACGGTAGTGGAGATAGGTGGAACGGAGGAGGGGACGGTGATCGAGGAGAAGCAACAAAGAAGGATTCGAAGAGTAGTAGTAGAAGGAGGGAAGAGGAGGGTGAAGAAGTGAAGAGGACTAGCGGGAAGCATAATAAGGATTCGTCGGGGCGAAAGGAGAGTAGAGAAAGTGAGAGGAAGTTGAAGGATGGGAGAAGTGAGGAGTTATTGGTTGATGGTGAAAAACAACAGCAACCACGTGTGAATAAGCAAGGGTTTGAAAATAATAATGCTATATTAGGAATGGTCATTTGGCATAGCAACCTTGTGACTTCGACTGTTTATAGACAGAATGTACTCTGGTTTCCCCAGAAGGTAGTCAATTTTGATATATGTGGCGGTTTTGTTGCAGATTCCAGGAAAATAGATGAGTTAAGAAGCCCTGAATTTGATAAGCAGCTTGAGAGGCGAACGAGGAAGAGGAGGGATGACTATGATGATGGTGGAAAGCTTCAAGATGATGTTGGAGATGCTTTTGATCAACATAGGGATGAAACTGCTAAGGATGGAAAGAAAAGGGATGACAGGCGAAAAGATGATAAATATAGAGATAAGTATAGGGAAGAAACGGACAAGGAGAACAAACACCGACATGACAAGCAACAAGACGAGCGTCCTTCAAAAGGTCATGCCAGCATTAGGTCTGATGATAAACATGTAAGGGAAGAGAAAAATAGCTTAGAGTCACGACAGAAGAGAACCAAGCTCCCAGAGAGTGACAGGGACCACTATCGTGACCGTGATGGAGAAAGAGAATGGGATCATGGCTTTGAATATGTTCGTGATCGTGAGCGCCGCAGTGAACGTGACCGTGGTCGTGATTATGATTTTGACAGGGATCAAGATTATGATTTTGATTTGGATCGTGATTCTCATGATCGTGACCGAGACAGAGAGCGTGGCCGTCACCGTGATCGTGATGGTTCACATTTGGATGATAGAAGTGCTAAAAGCAAAGAGGGAGGGGCAAAGAAAAGAACTTTAGATGACCTTGATGAATATAGTGACTCTAAATCTAGAGTTGTGAAGAGGCACTATCCTGATGCAGAGAAGAGGAGTTTGTGCAACAGTAGAGCTGATTCCGATATTGACAGGGGGAGATCCCAACCTCACCAAGCGCATGCAGATTCAATTGGGATTAACAACAAACACAGATCTTCTCCTGCTTCAAACTCACATATCGGCAGGGATGAATATAGAAATGCTAATGCCGAAGATCCAAAGTATAGAGACTCAACAGTAGAACAGAGAACCAAATTCTCAAGAGAGGGTTACTCTGGGATATCAGAGAGAGCCCCTAAATACAAATTAATGGAGAAGTCCACTAAAATAGGTGAAGGTCGTGTAGCAGAATTGTCAGCTGAAAGGTCTTCCTGTGCCAAGGCTTCCCCAATGGGCCTGATTGAAAGATCTCCTTCATCAACAAGCATTGAGCGCAGACATGTCAATAAAAGTGGGGTTAAGAGGAGCGTTGATGCAAGAGACGATGATAGACTTGGCCAGGAGTTGACTCTTGAGAAACTACCATTGGACGAGCCCTCACGTGCAGATTCATCTTTTTATGGTAGGACTAGTCAGAGCAATGCATCACTGGTTCCTCCTCCACCTGCTTTCAGGGTTGCCCTAGATAGACCTTATATGGTTTCATTGGAGGATGAAGTTAGAGATAACTCCAATAATCGATACAGAAGAAATGGTGAACCTGGTTTTGGAAGAGTGCATGGTGGCAATTCTTGGAGGGCAGTTCCAAACTGGACTTCTCCCATACAAAATGGATTTGTTCCCTTCCCACCTGGTCCAGCTCATGTAGGTTTTCACACAATGATGCCACAATTTACATCTCAGCCTATCTTCGGTGTTAGGCCTCCAATGGACCATGCTGGCATTCCTTACCATATTCCTGATGGTGACAGGTTTCCTAGTCACTTGCGCCCACTGCCTGGGTGGCAAAATATGATGGATGGTACAGTACCTGCTCATTTGCATGGGTGGGATAGCAATAATGGTATAATCAGAGATGATCCTCACATGTATGGTGGTTCTGATTGGGACAGGAACAGGCACTCAACAAATAGTCATGGTTGGGAATCTGGTTCCGAGACTTGGAATGAACAGAATTCTGATTCAAAGAAGGACTTGTCTTCCCCAACCTGCAAAGATGAATCTGTTCCCACCCTGGTTGACAATGGTGTGACTGATCAGTCTACTAAGATTTCTCTTGATGAACACAACCGGGATGAATTTCATGAGAAATCTCCTGAAACAAAGTTCTCCAGTCTCAATTTTCCTACAGAAGTACCTTTGAACTCTTCTTTCAAAACTATTCCTGAAAAGGTTCCTGATACAACACAAAATGACAGTACTTCTTTTCTCAGTCGTTTCTACCTCTTGAAACTTGACATTTCAGAAGACCTGGTATTGCCAGAGTTATATAACCAGTGTATGTGTACTCTGAATGCTGACAAGAATTCATCCATTGATGCAGATGCTAGTACAGAACCATTCTTGAAGAATGATAGGAGAGCACAACAGAAATATGCCACCACTTTATCTAGGCAGTCTCTTTTTCCAGAAATCGGTAATTCTGTCTTCCAGAGAGCCATGGACATTTACAAGAAGCAGAGGGTGAAACTTCCTAATGAGGGGGAGTTAGATATTATTGTGCCATCCAACCCGATGGAAGTGGATGATGCACTTCCCTCTTCCAGTCTGGATGATAAAAAGGTTTCTATTTCGGCTTCTGAGGGAACAAAAGATGTGCTAATACCTGCAGTAGAACTGGAGAAAATGAAAGCTTCATCTCCTGCAAATGATCATATAGATGACACCAATCAAACCTGCAATCAAATGGAGCAAGATTACGATTCTACCCATTCTCCGAAGATGGACACGGCTGGTCAATCTTCTGTTCATGAGAACCGAGAAGAAGCTGTAACGGCTTTGTGTAAGAATGAGGATAAGGACACTTCGGATAACGTGAAATCAAGCGATGAAGAGGATAATAACTCATCGGCGTCCAAAAGTGAAGCTGAGTTGGCCCAAGCTTTGCAGGAAGATGGTGATAACATGAATAGCAAAGCCAAAACTTGTGGTCATGGCACAAAAGTTAACCTCTTAATTTTAGAGGATGGGTCTCCCAAACTCTGTGATGCTTTGATGCCTGGTTCAAATGAGTCTGATTCGCTAATTTTAAGCCGGATACATCATTCTCCTGAAAGTACACATTGA 3483 0.4419 MTRSSKHKSSKHSSRDAREYSDSERDSGVKYRKSKEESAAAAKVEKRRAVDSNSKEGEYSDDYGGGSSKRRKDGSGDRWNGGGDGDRGEATKKDSKSSSRRREEEGEEVKRTSGKHNKDSSGRKESRESERKLKDGRSEELLVDGEKQQQPRVNKQGFENNNAILGMVIWHSNLVTSTVYRQNVLWFPQKVVNFDICGGFVADSRKIDELRSPEFDKQLERRTRKRRDDYDDGGKLQDDVGDAFDQHRDETAKDGKKRDDRRKDDKYRDKYREETDKENKHRHDKQQDERPSKGHASIRSDDKHVREEKNSLESRQKRTKLPESDRDHYRDRDGEREWDHGFEYVRDRERRSERDRGRDYDFDRDQDYDFDLDRDSHDRDRDRERGRHRDRDGSHLDDRSAKSKEGGAKKRTLDDLDEYSDSKSRVVKRHYPDAEKRSLCNSRADSDIDRGRSQPHQAHADSIGINNKHRSSPASNSHIGRDEYRNANAEDPKYRDSTVEQRTKFSREGYSGISERAPKYKLMEKSTKIGEGRVAELSAERSSCAKASPMGLIERSPSSTSIERRHVNKSGVKRSVDARDDDRLGQELTLEKLPLDEPSRADSSFYGRTSQSNASLVPPPPAFRVALDRPYMVSLEDEVRDNSNNRYRRNGEPGFGRVHGGNSWRAVPNWTSPIQNGFVPFPPGPAHVGFHTMMPQFTSQPIFGVRPPMDHAGIPYHIPDGDRFPSHLRPLPGWQNMMDGTVPAHLHGWDSNNGIIRDDPHMYGGSDWDRNRHSTNSHGWESGSETWNEQNSDSKKDLSSPTCKDESVPTLVDNGVTDQSTKISLDEHNRDEFHEKSPETKFSSLNFPTEVPLNSSFKTIPEKVPDTTQNDSTSFLSRFYLLKLDISEDLVLPELYNQCMCTLNADKNSSIDADASTEPFLKNDRRAQQKYATTLSRQSLFPEIGNSVFQRAMDIYKKQRVKLPNEGELDIIVPSNPMEVDDALPSSSLDDKKVSISASEGTKDVLIPAVELEKMKASSPANDHIDDTNQTCNQMEQDYDSTHSPKMDTAGQSSVHENREEAVTALCKNEDKDTSDNVKSSDEEDNNSSASKSEAELAQALQEDGDNMNSKAKTCGHGTKVNLLILEDGSPKLCDALMPGSNESDSLILSRIHHSPESTH 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0565 1160 PANTHER OS05G0595500 PROTEIN 1 1160 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 221 456 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 12 146 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 540 619 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 823 839 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 1035 1059 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 1143 1160 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 777 822 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 483 503 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 459 482 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 767 845 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 221 511 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 1035 1097 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 559 598 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 1 155 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 1136 1160 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 1061 1090 - -
Lal21g0565 1160 MobiDBLite consensus disorder prediction 603 617 - -
Lal21g0565 1160 PANTHER LOW PROTEIN: ZINC FINGER CCCH DOMAIN PROTEIN 1 1160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0565 Lal-Chr21 4161636 4170554 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0565 K22909 - gmx:100814864 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0558 17 3958706 3965546 Lal21g0565 21 4161636 4170554 LSH
Lal21g0565 21 4161636 4170554 Lal4g0486 4 3464561 3472315 LSH