Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0426 ATGTCACCTTCTCCTTCAGAAAACCGAAGCAGATGGAAGAAGCGCAAGAGAGAATCGCAAATCGGCCGGCGGCAACAGAAGCACCACCACCACGAAGACGACGACGATGATGAAGAGGAGAATCGCAATGCCACCGCCGATGAAGACCACGATGATGACTCTGAGGACCTATCTCATCACCCTAACCCTCAATCCGCTACCAATCCCCAATCGCACCACGAGATCGAGGTCCTTTCCGACCACGCCGTCCAGATTTCGCAATTCCCTGTCGTTGTCAAGCGCTCCGTCAACCGCCCTCACTCCTCCGTTGCTGCAATCATTGCTCTGGAGCGAGCTATTGAGTTCGGCGACAACAATATCCGTCAGCTCCGGAACGCTCCTGTGCTTGAGAATGTGTCCCATGGTCAGCTCCAGGCGCTGTCTACTGTCCCTGCCGATAGTGCTGCCTTCGATCAGGACCATTGTGGTGATGGCAGTAATTCGAGCTTTGTCATCACTACTCCAGCGATTTTGGAAGGCCGTGGCATTGTGAAACACTTTGGGAATAGGGTGCTTGTAGTTCCCATGCATTCAGATTGGTTTTCACCAGTCTCAGTGCATCGACTAGAGAGACAAGCAGTGCCACATTTCTTTTCTGGAAAATCACCAGATCATACTCCAGAGAAGTACATGGAGTGTAGGAACTACATTGTTGCACTATACATGGAAGACCCAGAGAAGAGGATTACGGTCTCGGGTTGCAAGGGATTGTTAGTTGGGGTTGATAATGAAGATTTAACAAGAATTTTCAGGTTCCTTGATCATTGGGGAATTATCAATTACTGTTCTCGGGTGCCTTGTCATAAGACTTGGAATGATATGTCCTGCCTGATGGAGGACACAAATGGAGAGGTCCGTGTCCCATCGGATACTTTAAAATCCATTGACAGTTTGATCAAATTTGACAAGCCTAATTGTAAGCTCAGAGCAGACGAAATTTATTCATCACTGACAACTCAGAATCCTGATGTCTCTGACCTGGATGACAGAATAAGAGAGGGTCTATCTGAAAATCATTGCAATTATTGTTCTCGTCCTCTTCCTGTTGTATACTATCAGTCACAAAAGGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGATTTGTCATTGGTCATTCAAGTCTTGATTATATAAGGGTGGATTCAACAAGGGATTATACTGAGCTAGATGGGGATAGTTGGAGTGATCAAGAAACTTTGGTGCTGCTTGAAGCAGTGGAGATTTACAAAGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATCAATGTTCCAAGCATGTCTTCATCTAATGTGATGGATAGAGATGATAGTGGAAGATTGCATCGTTGCTTAAATGGGGATTCTGAAGGACCTTTCCATCAAAGCAGCGACTCTGACAGGAGGCTTCCTTTTGCAAATTCTGGAAATCCTGTTATGGCTCTGGTTGCGTTTTTAACCTCTGCGGTTGGACCAAGAGTAGCTGCTTCTTGTGCGCATGCAGCATTAGGAGTATTGTCCGTGGATAATTCTGGGAGTTCATCGCAGATGGAAGCACTGGTACATGGTAATAGGGCAAATTTGGAAAGCACACATAGTAAAGATGGTGGGCCTCGTGGAGAAATGACAATTTTAACTGATCATAATGAGGATAAGGGTGGGACAATACCACTATCTTTGGAGAAAATTAAAGAGGCAGCTAAAGCCGGCCTCTCTGCTGCAGCAACAAAAGCCAAATTGTTTGCTGATCATGAACAACGAGAAATTCAGAGGCTGTGTGCTAATATCGTTAATCATCAGTTGAAAAGATTGGAATTGAAGCTGAAGCAGTTTGCAGAAATTGAAACATTGTTGATGAAAGAATGTGAACAAGTCGAGAGGACAAGGCAGAGGTTTGCTGCGGAACGGTCCCGTGTTATATCAGCACGTCTTGGAACTGGGGGAGCCACACCTCCAATGAATACATCAGGTGTTGGCCCTTCCATGGTTAACAGTAATGGCAACAGCCGGCAACAGATGATCTCTGCTTCTCCCTCACAACCCAGCATCTCAGGGTATGGCAACAACCAACCAGTTCATCCTCACATGTCCTTTGGTCCACGACCTTCAATGTTCGGGTTGGGGCAAAGGTTGCCCCTATCTATGATACAGCAATCACAATCAGCTTCTTCAAATGCCCTGTTCAATGCCCCTAGTAATGTGCAGCCCACTTCAAATCATCCATTGTTGAGGCCTGTGTCAGGGACTAACTCTGGTTTAGGTTAA 2364 0.456 MSPSPSENRSRWKKRKRESQIGRRQQKHHHHEDDDDDEEENRNATADEDHDDDSEDLSHHPNPQSATNPQSHHEIEVLSDHAVQISQFPVVVKRSVNRPHSSVAAIIALERAIEFGDNNIRQLRNAPVLENVSHGQLQALSTVPADSAAFDQDHCGDGSNSSFVITTPAILEGRGIVKHFGNRVLVVPMHSDWFSPVSVHRLERQAVPHFFSGKSPDHTPEKYMECRNYIVALYMEDPEKRITVSGCKGLLVGVDNEDLTRIFRFLDHWGIINYCSRVPCHKTWNDMSCLMEDTNGEVRVPSDTLKSIDSLIKFDKPNCKLRADEIYSSLTTQNPDVSDLDDRIREGLSENHCNYCSRPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSLDYIRVDSTRDYTELDGDSWSDQETLVLLEAVEIYKENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSSSNVMDRDDSGRLHRCLNGDSEGPFHQSSDSDRRLPFANSGNPVMALVAFLTSAVGPRVAASCAHAALGVLSVDNSGSSSQMEALVHGNRANLESTHSKDGGPRGEMTILTDHNEDKGGTIPLSLEKIKEAAKAGLSAAATKAKLFADHEQREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQVERTRQRFAAERSRVISARLGTGGATPPMNTSGVGPSMVNSNGNSRQQMISASPSQPSISGYGNNQPVHPHMSFGPRPSMFGLGQRLPLSMIQQSQSASSNALFNAPSNVQPTSNHPLLRPVSGTNSGLG 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0426 787 MobiDBLite consensus disorder prediction 1 72 - -
Lal4g0426 787 Gene3D - 191 277 IPR036388 -
Lal4g0426 787 MobiDBLite consensus disorder prediction 700 724 - -
Lal4g0426 787 PANTHER SWI/SNF COMPLEX-RELATED 65 786 - -
Lal4g0426 787 Coils Coil 106 126 - -
Lal4g0426 787 Gene3D - 407 457 - -
Lal4g0426 787 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 65 786 - -
Lal4g0426 787 ProSiteProfiles Zinc finger ZZ-type profile. 348 402 IPR000433 GO:0008270
Lal4g0426 787 SUPERFAMILY Homeodomain-like 408 461 IPR009057 -
Lal4g0426 787 MobiDBLite consensus disorder prediction 37 52 - -
Lal4g0426 787 Pfam SWIRM domain 188 274 IPR007526 GO:0005515
Lal4g0426 787 MobiDBLite consensus disorder prediction 700 735 - -
Lal4g0426 787 ProSiteProfiles SWIRM domain profile. 185 283 IPR007526 GO:0005515
Lal4g0426 787 CDD SANT 410 452 IPR001005 -
Lal4g0426 787 Pfam SWIRM-associated region 1 602 677 IPR032451 -
Lal4g0426 787 Pfam Myb-like DNA-binding domain 410 452 IPR001005 -
Lal4g0426 787 SUPERFAMILY Homeodomain-like 184 276 IPR009057 -
Lal4g0426 787 SMART sant 407 455 IPR001005 -
Lal4g0426 787 ProSiteProfiles SANT domain profile. 406 457 IPR017884 -
Lal4g0426 787 MobiDBLite consensus disorder prediction 749 787 - -
Lal4g0426 787 ProSiteProfiles Myb-like domain profile. 403 453 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0426 Lal-Chr4 2964394 2971500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0426 353 449 EF-hand Containing Proteins AT3G07740 32.075 5.95e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0426 K11649 - gmx:100780440 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0426 4 2964394 2971500 Lal4g0426 4 2964394 2971500 ECH
Lal17g0483 17 3331953 3338726 Lal4g0426 4 2964394 2971500 LSH
Lal21g0526 21 3801255 3804632 Lal4g0426 4 2964394 2971500 LSH