Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0526 ATGCTTTTGATTTCAGAGAATAAGGCTAAAGTTGGTTCATGGGGTCAAAATGAGGGTGGGACAAGACCACAGTCTATGGAGAAAGTTAAAGATGTGGCTAAAGCAGGTCTCTGTGTTGCAGCAACAAAAGCCAATTTGTTTGCCGATCATGAAGAACGAGAAATTCAGAGGCTATCGTTAACCATCAGATTGGAATTGAAGCTGAAGCAGTTTGCAGAAATTGAAACATTGTTGATGAAAGAATGCGAACAAGTCGAGAGGACGGGGCAGAGGTTTGCGGCTGAACGGTCCCGCGTTACATCAGCACGTCCGACGACCTTCAATGTTTGGGTTGGGACAAAGGTTGCCCTATCTATGATACAACAATCACTATCAGCTTCTTCAAATGCCTCTAGTAATGTTTAG 405 0.437 MLLISENKAKVGSWGQNEGGTRPQSMEKVKDVAKAGLCVAATKANLFADHEEREIQRLSLTIRLELKLKQFAEIETLLMKECEQVERTGQRFAAERSRVTSARPTTFNVWVGTKVALSMIQQSLSASSNASSNV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0526 134 PANTHER SWI/SNF COMPLEX-RELATED 9 116 - -
Lal21g0526 134 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C-LIKE 9 116 - -
Lal21g0526 134 Pfam SWIRM-associated region 1 35 101 IPR032451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0526 Lal-Chr21 3801255 3804632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0526 K11649 - gmx:100780440 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0526 21 3801255 3804632 Lal21g0526 21 3801255 3804632 ECH
Lal17g0483 17 3331953 3338726 Lal21g0526 21 3801255 3804632 LSH
Lal21g0526 21 3801255 3804632 Lal4g0426 4 2964394 2971500 LSH