Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0398 ATGCATCCTTTTTGCTGCGTTTCCACGATTTCCGATCAGCCTTCACCAGTCAAACCCTCACTAACTCCTTTCCCTGACTTCACCGCCGCCATGCCTCCTCTTCCTTCCACCGCCGCCGCAATTAGATCCGACGCAATTCCCCGCGTCAGCCATAACCACAGTCACAGCAGCAGCCTCTCCGTCGATTACACTCGCCTGAGTCAGCGTGAACAGAAGCAGCTTCCGGCGGTTGTGGTGACGGATGTGAAGATCAACGACCTCGTCGGTAATGGAATCTCCGGAATACTTTACAAGTGGGTGAATTACGGTAAAGGATGGAGGCCTAGGTGGTTCGTGCTCCAAGACGGTGTTCTCTCTTACTACAAGATTCACGGTCCCGATAAGATCATTGTCAATCTCGAAACTGAGAAAGGATCCAAAGTCATCGGTGAAGAATCAATGCGAAGAATATCTCATAACACCAATTCATATTCTTACCAAAACCATCGCAAACCCTTCGGTGAAATCCACCTTAAGGTTTCGAGTATTCGGGAGAGTAAATCGGATGATAAGCGATTTTCTGTATTTACCGGAACGAAGAGGATGCATTTGAGGGCGGAGACACGAGAAGATAGAGTGGCATGGATGGAGGCATTGCAGGCAGTAAAGGATATGTTCCCTCGTATGTCAAACAGTGAGTTGATGGCTCCGGTGGACAATCTAAAGGTTTCAACTGAGAAACTGAGAAATCGGCTTCTAGAAGAGGGGGTAAGTGAGCCAGCAATTCAGGACAGCGAGCAAATTATGAGGACTGAGTTTGCAGCCCTGCAAAACCAGCTCGTGCTTCTTAAGCAGAAGCACTCCATCTTAATTGATACTTTGCGTCAATTAGAGACGGAAAAGGTAGATCTGGAGAATACAGTCGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGACGCTTCCTCTACATTAAGGCAGGAAAAATTGAGTGAAGGAACTGCAAGTGACTCTGAGGATGATAATGAGAGACATGATGCTGCAGAGGAGGAAACAGATGATGATGAGAATGCCTTTTTTGATACTCGCGATTTTCTATCATCCGCTTCTTGCAAAAGTAATGGGTCTGATTATAGAGTGTCATCTTTCTCTTCAGATAATGAAGGGGTTTATGCATTTGAATCGGATGAGGATATAAATCCTTCAATTACAATTGCAGTACCCAACTACCCTCATGTTAAGCGGCGAAAGAAATTGCCTGACCCTGTAGAAAAGGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGACAATATTGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCGTCCCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCATATCTGCTGGACCAAGCATATGAATGGGGAAGAATGGGTAATAGCCTCATGAGGATTCTCTATGTTGCTGCTTTTGCTGTATCTGGCTATGCTTCAACTGAAGGAAGGATTTGCAAACCATTTAATCCATTACTTGGGGAAACATATGAGGCTAACTTCCCAGATAAAGGCCTTCGCTTTTTCTCAGAGAAGGTCAGTCATCACCCTATGATAGTTGCATGTCACTGTGAGGGTACGGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGGTCAATTCAGCTTGACCCTGTTGGTACTTTGACTTTGGAATTTGATGATGGGGAGGTTTTTGAGTGGAGCAAGGTTACTACATCCATATATAATCTCATATTGGGAAAGCTGTACTGTGATCACTATGGTACAATGCGGATACAAGGAAACCGAGATTACTCATGCAGACTTAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCATCAGGTTCATGGTGTTGTTCTAGATAGGAATGGAAAAACAGCATCGACTTTGTTTGGGAAATGGGATGAAAGCATGCATTATATTAATGGAGACTACAGTGGGAAGGGGAAGGGTCTTGAATCATTGTCAGAAGCTCGTTTACTCTGGAAGAGGAGCAAGCCTCCTACGGATCCCACCAGATATAACTTCACTCGTTTTGCCATCACATTAAATGAACTTACCCCTGGGTTGAAGGAAAAACTACCACCTACAGATTCCAGATTAAGACCAGACCAGAGGTATTTGGAAAATGGGGAGTTTGAGATGGCAAATTCAGAAAAGCTACGATTAGAGCAGCGGCAACGCCAGGCTCGGAAAATGCAAGAGCGGGGTTGGCAACCACAGTGGTTTTCCAAGGACAAAGTTAGCGGGACACACCGCTATATAGGAGAATATTGGGAAGCCAGAGAAGAAGGAAATTGGGACTCTTGTCCTGACATCTTTGGCCAAATTCTTTCGGATCATCTTTCTGATGAAGGTCAAATTACAGCTTAG 2418 0.4433 MHPFCCVSTISDQPSPVKPSLTPFPDFTAAMPPLPSTAAAIRSDAIPRVSHNHSHSSSLSVDYTRLSQREQKQLPAVVVTDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNLETEKGSKVIGEESMRRISHNTNSYSYQNHRKPFGEIHLKVSSIRESKSDDKRFSVFTGTKRMHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNLKVSTEKLRNRLLEEGVSEPAIQDSEQIMRTEFAALQNQLVLLKQKHSILIDTLRQLETEKVDLENTVVDESQRQWNDQDASSTLRQEKLSEGTASDSEDDNERHDAAEEETDDDENAFFDTRDFLSSASCKSNGSDYRVSSFSSDNEGVYAFESDEDINPSITIAVPNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDQAYEWGRMGNSLMRILYVAAFAVSGYASTEGRICKPFNPLLGETYEANFPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFEWSKVTTSIYNLILGKLYCDHYGTMRIQGNRDYSCRLKFKEQSIIDRNPHQVHGVVLDRNGKTASTLFGKWDESMHYINGDYSGKGKGLESLSEARLLWKRSKPPTDPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEFEMANSEKLRLEQRQRQARKMQERGWQPQWFSKDKVSGTHRYIGEYWEAREEGNWDSCPDIFGQILSDHLSDEGQITA 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0398 805 MobiDBLite consensus disorder prediction 306 352 - -
Lal4g0398 805 Pfam Oxysterol-binding protein 423 778 IPR000648 GO:0008289
Lal4g0398 805 SMART PH_update 90 219 IPR001849 -
Lal4g0398 805 SUPERFAMILY Oxysterol-binding protein-like 418 797 IPR037239 -
Lal4g0398 805 ProSiteProfiles PH domain profile. 89 217 IPR001849 -
Lal4g0398 805 CDD PH_ORP_plant 92 224 - -
Lal4g0398 805 Pfam Pleckstrin homology domain 97 213 - -
Lal4g0398 805 MobiDBLite consensus disorder prediction 336 351 - -
Lal4g0398 805 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 796 - -
Lal4g0398 805 Gene3D - 509 685 - -
Lal4g0398 805 Gene3D - 90 219 IPR011993 -
Lal4g0398 805 Gene3D - 720 783 - -
Lal4g0398 805 MobiDBLite consensus disorder prediction 306 324 - -
Lal4g0398 805 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 796 IPR000648 GO:0008289
Lal4g0398 805 Coils Coil 731 751 - -
Lal4g0398 805 Coils Coil 280 307 - -
Lal4g0398 805 SUPERFAMILY PH domain-like 92 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0398 Lal-Chr4 2751661 2759395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0398 K20456 - gmx:100137077 1384.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0398 4 2751661 2759395 Lal4g0398 4 2751661 2759395 ECH
Lal17g0452 17 3094545 3100849 Lal4g0398 4 2751661 2759395 LSH
Lal21g0505 21 3614944 3621985 Lal4g0398 4 2751661 2759395 LSH