Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0505 ATGCCAACTCTTCCTTCCACCGCCACCGAAATTAGATCCGATTCGATCCCCCGCCACAGCCATAGCCACAGTCACGGCAGCATCATCTCCGTCGAGTGCATGCGCATGAGTCAGCGTGAACAGAAGCAACCGCAGCCGGTGGCGGTGATGGACGTGAAGATCAACGATCTCGTTGGTAACGGAATATCTGGAATACTGTACAAGTGGGTGAATTACGGTAAAGGATGGAGGCCTAGGTGGTTCGTGCTCCAAGACGGTGTTCTCTCTTACTATAAGATTCACGGTCCTGATAAGATCATTGTCAATCCTGAAACCGAGAAAGGATCCAAAGTCATCGGCGAAGAATCCATGCGCAGAATCTCTCGTAACCGCAATTCCTATTCTTATCAACACCGTCGCAAGCCCTTCGGTGAAATACACCTCAAGGTTTCGAGTATTCGGGAGAGTAAATGCGATGATAAGAGATTTTCAGTATTTACCGGAACGAAGAGGATGCATTTTAGGGCAGAGACACGAGAAGATAGAGTAGCATGGATGGAGGCATTGCATGCAGTGAAGGAAATGTTTCCTCGAATGTCAAACAGTGAGTTGATGGCTCCAGTGGACAATGTAACCGTTTCAACTGTGAACCTGAGGCACCGGCTTCTAGAAGAAGGAGTGAGTGAGCCAGCAATTCAGGACAGTGAGCAAATTATGAGGACTGAGTTTGCAGCCCTGCAAAAACAGCTTGTTCTTCTTAAGCAGAAACACTCCATCTTAATTGATACTTTGCGGCAATTAGAGCTTGAGATGGTGGTAGTTGTTGGTGTGGTCGTGCTCTTCAAGTTCTTGGAAGAGAACAGCTTTTTGAGCTTTGATTACTTGGCAATAGGGGGGGAAGAGGTTGAGGTGCTGCTTTTAGAAGTGAGGCCGAGTCTGTGTGAGACAGAAAAGGTTGATCTGGAGAATACAGTCGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGAGGCCTCCTCTACATTAAGACAGGGAAGATTGAGTGAAGGAACTGCAAGTGATTCTGAGGATGATAATGAAAGACATGATGCTGCAGAGGAGGAAACAGATGATGATGAGAATGGCTTTTTTGATACTCGTGATTTTCTATCATCTAGTTCTTTCAAAAGTAATGGGTCCGATTATATAGTGTCGTCTTCCTCTTCAGATAATGAAAGGACCCATGCATTTGAAACTGAGGAGGATGTACATCCTTCAGTTAGAATTGCTGTAACCAACTACCCTCATGTTAAGCGGCGAAAAAAATTGCCCGACCCTGTAGAAAGAGAGAAGGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCCTCCCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCATATCTGCTCGACCAAGCATATGAATGGGGAAGACAGGTAGGTCTAGATTTGTCTGATAGTACTATAGATGCAGTATTGGGTGCATTCTTCCAATTTTTAACTAATGGAGGTGCCGTGCAGGGTAATAGCCTCATGAGGATTCTCTATGTTGCTGCTTTTTCTGTATCTGGCTATGCTTCAACTGAAGGAAGAATTTGCAAACCATTTAATCCATTACTAGGGGAAACATACGAGGCTAACTTCCCTGATAAAGGCCTTCGCTTTTTCTCCGAGAAGGTCAGTCATCACCCTATGATAGTCGCATGTCATTGTGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGTTAGACCCCGTTGGTACTTTGACTTTGGAATTTGATGATGGGGAGGTTTTTGAATGGAGCAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGTTGTACTGTGATCACTATGGTACAATGCGTATACAAGGAAACCGGGATTACTCATGCAGACTGAAATTCAAGGAACAGTCTATAATTGACCGAAATCCTCACCAGGTTCATGGTGTTGTTCTAGATAGGAATGGAAAAATAGCATCAACATTGTTTGGAAAATGGGATGAAAGCATGAATTATGTTAATGGAGACTACAGTGGAAAGGGGAAAGGTCATGAATCATTGTCAGAAGCCCATTTACTCTGGAAGAGGAGCAAGCCTCCTAAGGATCCTACTAGATATAACTTCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTGAAGGAAAAGTTACCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTTTGAGATGGCAAACTCAGAAAAGTTACGATTAGAACATCGACAACGCCAGGCTCGGAAAATGCAAGAGAGGGGTTGGCAACCAAGGTGGTTTTCTAAGGAGAAAGCGCATGGGGCATTCCGCTATATAGGAGGGTATTGGGAGGCAAGACAAGAAGGAAACTGGGACTCCTGTCCTGACATCTTCGGCCAAATTCCCTCCGATCATCTTTCTGATGAAGGTCAAATTACAGCTTAG 2553 0.4399 MPTLPSTATEIRSDSIPRHSHSHSHGSIISVECMRMSQREQKQPQPVAVMDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNPETEKGSKVIGEESMRRISRNRNSYSYQHRRKPFGEIHLKVSSIRESKCDDKRFSVFTGTKRMHFRAETREDRVAWMEALHAVKEMFPRMSNSELMAPVDNVTVSTVNLRHRLLEEGVSEPAIQDSEQIMRTEFAALQKQLVLLKQKHSILIDTLRQLELEMVVVVGVVVLFKFLEENSFLSFDYLAIGGEEVEVLLLEVRPSLCETEKVDLENTVVDESQRQWNDQEASSTLRQGRLSEGTASDSEDDNERHDAAEEETDDDENGFFDTRDFLSSSSFKSNGSDYIVSSSSSDNERTHAFETEEDVHPSVRIAVTNYPHVKRRKKLPDPVEREKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDQAYEWGRQVGLDLSDSTIDAVLGAFFQFLTNGGAVQGNSLMRILYVAAFSVSGYASTEGRICKPFNPLLGETYEANFPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFEWSKVTTSIYNLILGKLYCDHYGTMRIQGNRDYSCRLKFKEQSIIDRNPHQVHGVVLDRNGKIASTLFGKWDESMNYVNGDYSGKGKGHESLSEAHLLWKRSKPPKDPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEFEMANSEKLRLEHRQRQARKMQERGWQPRWFSKEKAHGAFRYIGGYWEARQEGNWDSCPDIFGQIPSDHLSDEGQITA 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0505 850 Pfam Oxysterol-binding protein 440 822 IPR000648 GO:0008289
Lal21g0505 850 SUPERFAMILY PH domain-like 62 193 - -
Lal21g0505 850 Pfam Pleckstrin homology domain 67 183 - -
Lal21g0505 850 SMART PH_update 60 189 IPR001849 -
Lal21g0505 850 Gene3D - 765 827 - -
Lal21g0505 850 MobiDBLite consensus disorder prediction 323 342 - -
Lal21g0505 850 MobiDBLite consensus disorder prediction 323 369 - -
Lal21g0505 850 MobiDBLite consensus disorder prediction 1 24 - -
Lal21g0505 850 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 37 272 IPR000648 GO:0008289
Lal21g0505 850 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 307 491 IPR000648 GO:0008289
Lal21g0505 850 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 519 841 IPR000648 GO:0008289
Lal21g0505 850 ProSiteProfiles PH domain profile. 59 187 IPR001849 -
Lal21g0505 850 SUPERFAMILY Oxysterol-binding protein-like 435 842 IPR037239 -
Lal21g0505 850 Gene3D - 554 731 - -
Lal21g0505 850 Gene3D - 60 189 IPR011993 -
Lal21g0505 850 MobiDBLite consensus disorder prediction 353 368 - -
Lal21g0505 850 MobiDBLite consensus disorder prediction 387 407 - -
Lal21g0505 850 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 307 491 - -
Lal21g0505 850 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 37 272 - -
Lal21g0505 850 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 519 841 - -
Lal21g0505 850 CDD PH_ORP_plant 62 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0505 Lal-Chr21 3614944 3621985 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0505 K20456 - gmx:100137077 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0505 21 3614944 3621985 Lal21g0505 21 3614944 3621985 ECH
Lal17g0452 17 3094545 3100849 Lal21g0505 21 3614944 3621985 LSH
Lal21g0505 21 3614944 3621985 Lal4g0398 4 2751661 2759395 LSH