Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0375 ATGGAGGAGCGGCTCCCGCCGCCGCCGCCACCACCTCCTCCTCCTCAACCTTATGCTACCAATAGCCCGAAACTCCAAATACCCTATATTGGCCCCGGCACCTACGTTGTCCAAGTCCCAAAGGACCAAGTCTACCGTATTCCTCCACCCGAGAATGCTCGAATCGCCGAGAATTATCGGAACTCTCCGGGGAGGGACAAGAAGCGATCATGTTGTTGTTGTTTTTTTATTTGTTTAATCACTTTCATTGCCATACTTATTATTGTCGGAGCCATAATTGGTGGACTTTTCTCCATTGTATTGAAGCCAAAAAGCCCTAAGTTTTCCATTCAACGTTTTCAACTCAAGAACTCAACACGCCCCTTATATAACATCACATTAAAAGTTAACAATCCAAACTCCAAAGTGGGCATAAATTATAAAGGAGGGGACGTATCCCTTTCGTTAAAGCAAAGAGAGATTGCTAAGGGAGCTTACCCTAGTTTTTATGAAGCCCATGATAGTTCAAAGGAGATTCGATTGGCTTTGAAAGCCTCAAAAGGTGATTTACCTAAGGAGGTGGATAAAAGCATGAAAAACAAGAAAAAGAAAGTGAATGTCACGTTCACCTTAACCATTAAAGTACATGCACAAATGAAGATGTGGTCGTTGCGTAGTGGGACAATAACATACAACATTACGTGCCAAGTGAAGGTTGATATGTTGCCCAAGAACACTCGTGTACTTTCTCAACAATGTGAAACTAAACGACTCTAG 756 0.4286 MEERLPPPPPPPPPPQPYATNSPKLQIPYIGPGTYVVQVPKDQVYRIPPPENARIAENYRNSPGRDKKRSCCCCFFICLITFIAILIIVGAIIGGLFSIVLKPKSPKFSIQRFQLKNSTRPLYNITLKVNNPNSKVGINYKGGDVSLSLKQREIAKGAYPSFYEAHDSSKEIRLALKASKGDLPKEVDKSMKNKKKKVNVTFTLTIKVHAQMKMWSLRSGTITYNITCQVKVDMLPKNTRVLSQQCETKRL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0375 251 MobiDBLite consensus disorder prediction 1 25 - -
Lal4g0375 251 Pfam Late embryogenesis abundant protein 126 228 IPR004864 -
Lal4g0375 251 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 14 249 - -
Lal4g0375 251 MobiDBLite consensus disorder prediction 1 21 - -
Lal4g0375 251 Gene3D - 99 241 - -
Lal4g0375 251 SUPERFAMILY LEA14-like 95 210 - -
Lal4g0375 251 SUPERFAMILY Formin homology 2 domain (FH2 domain) 6 15 - -
Lal4g0375 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0375 Lal-Chr4 2561463 2562218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0375 32 248 EF-hand Containing Proteins AT5G21130 31.556 4.62e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0375 - - aprc:113853148 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0375 4 2561463 2562218 Lal4g0375 4 2561463 2562218 ECH
Lal17g0421 17 2848284 2849039 Lal4g0375 4 2561463 2562218 LSH
Lal21g0490 21 3484933 3485685 Lal4g0375 4 2561463 2562218 LSH