Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0421 ATGGAGGAGCGGATCCCACCACCGCCACCACCACCTCATCCTCAACCTTATGACCCCAATAGCCCCAAACTACAGGTACCCTACATTGGCCCTGGGACCTATGTGGTACAGGTCCCAAAGGACCAAATCTACCGCATTCCTCCACCGGAGAATGCTTATATAGCCGAGAGTTATCGGAATTCTCCGGGGAGGGATAAGAAGAGATCATGCAGTTGTTGGTGTTGTGTTTGTGTAATTGTTTTCATTATTATTCTTATCATTATTGGAGCCATAGTTGGTGGTCTTTTCTCCATTGTATTGAAGCCAAAGAGCCCTAGGTTTTCTATTCAACGTTTTCAACTCAAAAACTCAACTCACCCTCTATATAACATCACATTAAAAGTCAATAATCCAAACTCCAATGTAGGCATCAATTATAAAGAAGGAGGGGACGTTTCCCTCTCTTTAAAGAAGAGAGAAATTGCTTCAGGAACTTACCCTAGTTTCTTTCAAGCCAGTGATAATACAAAAGAGACTCGATTGACTTTGAAAGCCTCAAAAGGTGGTTTACCTAAAGAGGTGAATAAAAGCATGTCAAACAAGAAAAAGAAAGTGAATGTCAAATTCACCTTAAGCATTAAAGTCCATGCACAAATGAAGATGTGGTCTTTTCATAGTGGGACAATGAAATACGATGTTACGTGCCAATTGAAAGTGGATACGTTGGCGAAGAACACTCGTATACTTTCTCAACAATGTAAAACTAAGCGACTCTAG 756 0.4087 MEERIPPPPPPPHPQPYDPNSPKLQVPYIGPGTYVVQVPKDQIYRIPPPENAYIAESYRNSPGRDKKRSCSCWCCVCVIVFIIILIIIGAIVGGLFSIVLKPKSPRFSIQRFQLKNSTHPLYNITLKVNNPNSNVGINYKEGGDVSLSLKKREIASGTYPSFFQASDNTKETRLTLKASKGGLPKEVNKSMSNKKKKVNVKFTLSIKVHAQMKMWSFHSGTMKYDVTCQLKVDTLAKNTRILSQQCKTKRL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0421 251 MobiDBLite consensus disorder prediction 1 24 - -
Lal17g0421 251 Gene3D - 98 238 - -
Lal17g0421 251 SUPERFAMILY LEA14-like 91 209 - -
Lal17g0421 251 MobiDBLite consensus disorder prediction 7 21 - -
Lal17g0421 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 249 - -
Lal17g0421 251 Pfam Late embryogenesis abundant protein 125 216 IPR004864 -
Lal17g0421 251 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 14 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0421 Lal-Chr17 2848284 2849039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0421 31 248 EF-hand Containing Proteins AT5G21130 31.858 2.38e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0421 - - aprc:113853148 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0421 17 2848284 2849039 Lal17g0421 17 2848284 2849039 ECH
Lal17g0421 17 2848284 2849039 Lal21g0490 21 3484933 3485685 LSH
Lal17g0421 17 2848284 2849039 Lal4g0375 4 2561463 2562218 LSH