Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0490 ATGGAGGAGCGGTTGCCACCGCCACCACCTCCTCCTCAACCTTGTGCCACTAATAGCCCCCAACTTCAACTACCCTACATTGGCCCTGGCACCTACGTTGTCCAGGTCCCAAAGGATCAAGTCTACCGCATTCCTCCGCCGGAGAATGCTCAAATCGCCGAGAGATACCGGAACTATCCCGGGAGGGAGAAGAAGCGGTCATGTTGTTGTTGGTGTTGTGTTTGTTTAGTTGTTTTCATTGCAATTCTTATAATTATTGGTACCCTAATTGGTGCCCTTTTCTCCATTGTATTGAATCCAAAGAACCCTAGGTTTTCAGTTCAACGTTTTCAACTCAAGAACTCATCAACCCAACCTCTATACAACATCACATTAAAAGTCAACAATCCAAACTCCAAAGTGGGCATCAATTATAAACAAGGAGAGGATGTTTCCCTCTCTTTAAAGCAAAATGAGATTGCTTCAGGAACATACCCTAGTTTCTATCAATCCCATGATAATTCAAAAGAGTTTCGATTGGCTTTGAAAGCCTCAAAAGGTGATTTACCTATGCAAGTTGATAAATCCATGATGAACAAGAAAAAGAAAGTGAATGTCACATTCACCTTAACCATTAAAATCCATGCACAAATGAAGATGGGGTCGTTGCGTAGTGGAACAATAACATATGAAGTTACGTGCCAAGTGAAGGTGGATACGTTGGCCAAGAATACTCGTGTACTTTCTCAACAATGTGAAACTAAACGAATCTAG 753 0.421 MEERLPPPPPPPQPCATNSPQLQLPYIGPGTYVVQVPKDQVYRIPPPENAQIAERYRNYPGREKKRSCCCWCCVCLVVFIAILIIIGTLIGALFSIVLNPKNPRFSVQRFQLKNSSTQPLYNITLKVNNPNSKVGINYKQGEDVSLSLKQNEIASGTYPSFYQSHDNSKEFRLALKASKGDLPMQVDKSMMNKKKKVNVTFTLTIKIHAQMKMGSLRSGTITYEVTCQVKVDTLAKNTRVLSQQCETKRI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0490 250 SUPERFAMILY LEA14-like 86 207 - -
Lal21g0490 250 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 11 248 - -
Lal21g0490 250 Gene3D - 94 240 - -
Lal21g0490 250 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 248 - -
Lal21g0490 250 Pfam Late embryogenesis abundant protein 124 227 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0490 Lal-Chr21 3484933 3485685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0490 29 247 EF-hand Containing Proteins AT5G21130 32.000 2.57e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0490 - - aprc:113853148 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0490 21 3484933 3485685 Lal21g0490 21 3484933 3485685 ECH
Lal17g0421 17 2848284 2849039 Lal21g0490 21 3484933 3485685 LSH
Lal21g0490 21 3484933 3485685 Lal4g0375 4 2561463 2562218 LSH