Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0276 ATGGCCAGCCACGACTACGATGACGCACGCGCCGTCACAAGCGGTCCCGGCTACGACGAACAATTAGGTTACGACCCTAACTTCGTACCAGATTCCGTGAAATCCTTCGTCGTTCACCTCTACCGTCATATCCGTGAGAAAAACGTGTACGAGATTCACCAGATGTACGAAACCTCATTCCACACTCTCTCCGATCGTTTATTCAAGGACACGCCGTGGCCCTCGGTGGATGCGGTGGCGCATTACGTTGATAACGATCATGTGTTTTGCTTGTTGTATAAAGAGATGTGGTTTCGCCACTTATATGCTGGTCTCACTCCTACGCTACGACAGCGTATTGATTCGTGGGATAATTATTGTTCACTTTTTCAGGTTGTGCTACATGGTGTTGTTAATATGCAGCTTCCGAATCAGTGGCTCTGGGATATGGTAGATGAGTTTGTCTACCAGTTTCAGAGCTTCTGCCAATACCGTGCCAAGATGAAGAACAAAACTGAACAAGAGATTGCTCTCTTGAGACAGTTTGATCAGGCATGGAGTGTTTATGGTGTTCTCAACTTCTTGCAAGCGCTGGTGGAGAAATCTAACATTATTCAGATTCTGGAGAATGAGAAGGAAGGGCTGGAACAGTTTACTTCCACGGATGGGTATGATTACAATGGAGGGAGTAATGTGTTGAAGGTTTTGGGGTATTTCGGCATGGTTGGATTGCTGCGGGTACACTGTCTTTTGGGAGATTATCATACCGGTCTCAAGTGCCTTCAGCCAATTGATATTAGTCAACAGGGTGTTTACACCCTTGTTATTGGCAGCCACATTACCACCATTTATCACTATGGTTTTGCCAATCTTATGCTGCGCAGATATGTTGAAGCAATTCGTGAATTCAACAAGATTCTATTATACATCTATAAGACGAAGCAGTATCATCAGAAATCACCACAATATGAGCAGATACTGAAGAAGAATGAACAAATGTATGCTTTGCTGGCAATTTGTCTTTCACTCTGCCCCCAAAGCAGGCTTGTTGATGAAACCGTGAACTCTCAGTTGCGAGAGAAGTATGGTGAAAAGATGATCAGAATGCAAAGATATGATGATGAGGCATTTGCTATCTATGATGAGCTCTTTTCATATGCATGTCCCAAGTTCATTACCCCTTCAGCACCTAGCTTTGAGGAGCCTCTAGTAAACTATAACCAGGATGCTTATAGACTTCAATTGAAACTGTTCCTTTATGAGGCGAAGCAACAACAATTGTTGTTAGGTGTCCGGACCTACTTGAAAGTGTATTCAACAATCTCCCTTGCAAAACTTGCAAGTTACATGGAAGTGGATGAACCCACCTTAAGGACTATCTTGATAACATACAAGCATAAGACACATGCTGTTGATAGTGATGGAAAAGTCATCTCCAATGCTGATGTGGATTTCTTTATTGATGATGATATTGTTCATGTTGTAGAGTCTAAGCATGCCAAACGGTATGGGGATTATTTCCTGCGTCAGGTTGTCAAGCTTGAAGGGGTGATAAACGAGTTGGACGCTATAAAGCTAGATTGA 1563 0.4312 MASHDYDDARAVTSGPGYDEQLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYETSFHTLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYKEMWFRHLYAGLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWSVYGVLNFLQALVEKSNIIQILENEKEGLEQFTSTDGYDYNGGSNVLKVLGYFGMVGLLRVHCLLGDYHTGLKCLQPIDISQQGVYTLVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQSRLVDETVNSQLREKYGEKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLLGVRTYLKVYSTISLAKLASYMEVDEPTLRTILITYKHKTHAVDSDGKVISNADVDFFIDDDIVHVVESKHAKRYGDYFLRQVVKLEGVINELDAIKLD 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0276 520 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 12 509 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal4g0276 520 ProSiteProfiles PCI domain profile. 295 494 IPR000717 -
Lal4g0276 520 Pfam RNA polymerase I-associated factor PAF67 111 506 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal4g0276 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 24 520 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal4g0276 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 24 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0276 Lal-Chr4 1771960 1776221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0276 K15029 - qsu:112015326 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0276 4 1771960 1776221 Lal4g0276 4 1771960 1776221 ECH
Lal17g0302 17 1884671 1888998 Lal4g0276 4 1771960 1776221 LSH
Lal21g0407 21 2823626 2828197 Lal4g0276 4 1771960 1776221 LSH