Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0302 ATGGCAAGCCACGACTACGAAGATGCACGCGCCATCACTGGCGGTGTCGGATACGACGACCACCGTCAACAACCACCACAAGATCAATTATACGACCCTAACTTCGTCCCTGACTCCGTGAAGTCCTTCGTCGTCCACCTCTACCGTCACATCCGTGAAAAGAACGTGTACGAGATTCACCAGATGTACGAAACCTCATTTCACACACTCTCGGACCGTTTATTCAAGGACACGCCGTGGCCTTCGGTCGACGCGGTGGCGAATTACGTCGACAACGACCATGTGTTCTGTTTGCTCTTCAAGGAAATGTGGTTTCGCCATCTTTATGCTCGTCTCACTCCTACGCTACAACAACGTATTGATTCTTGGGATAATTACTGTTCTCTGTTCCAGGTTGTGTTACATGGTGCTGTTAACATGCAGCTTCCGAATCAGTGGCTTTGGGATATGGTGGATGAGTTTGTTTACCAGTTTCAAAGCTTTTGCCAATACCGCGCTAAGATGAAGAATAAGACTGAACAAGAAATTGCTCTATTCAGACAGTTTGATCAGGCATGGAGTGTTTATGGCGTTCTCAATTTCTTGCAAGCGCTTGTAGAGAAATCAAATATTATTCAGATTCTGGAGAATGAGAAGGAAGGGTTGGAACAATTTACTTCTACTGATGGGTATGATTACAATGGAGGGAGTAACGTGTTGAAGGTTTTGGGGTATTTTGGCATGGTTGGTTTGCTGCGTGTGCATTGTCTTTTGGGAGATTATCATACCGGTCTCAAGTGCCTGCAACCTATTGATATTAGTCAACAGGGAGTTTACACCATTGTCATTGGCAGCCATATTACCACCATTTATCATCATGGTTTTGCCAATCTTATGCTGCGCAGATATGTGGAAGCAATTCGTGAATTCAACAAAATTCTATTGTACATTTACAAGACAAAGCAGTATCATCAGAAATCGCCACAATATGAGCAGATACTGAAAAAGAATGAACAAATGTATGCCTTGCTGGCAATTTGCCTTTCATTGTGCCCCCAAAACAGGCTTCTTGATGAAACTGTAAACTCCCAGTTGCGAGAGAAGTATGGTGAAAAGATGATCAGAATGCAAAGATACGATGATGAGGCATTTGCCATCTATGACGAGCTCTTCTCGTATGCATGTCCAAAGTTTATTACCCCTTCAGCACCTAGCTTTGAGGAACCTCTAGTGAACTACAACCAGGATGCTTATAGGCTTCAATTGAAACTGTTCCTTTATGAAGCAAAGCAACAGCAATTGTTATCAGGTGTCCGGACCTTCTTGAAAGTGTATTCAACAATCTCCCTTACAAAACTTGCAAGTCACATGGAAGTTGATGAACCTACCTTAAGGACTATCTTGATAACATACAAGCATAAGGCCCATGCCGTTGATAGTGATGGAAAGGTTATCTCCAATGCTGATGTGGATTTCTATATTGATGATGATATGGTGCATGTTGTAGAGTTTAAACCCGCCAAACGGTATGGGGATTACTTCCTGCGTCAGGTTGTCAAGCTTGAAGGGGTTATAAACGAGATGGATGCTATAAAGCTAGATTGA 1584 0.4306 MASHDYEDARAITGGVGYDDHRQQPPQDQLYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYETSFHTLSDRLFKDTPWPSVDAVANYVDNDHVFCLLFKEMWFRHLYARLTPTLQQRIDSWDNYCSLFQVVLHGAVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALFRQFDQAWSVYGVLNFLQALVEKSNIIQILENEKEGLEQFTSTDGYDYNGGSNVLKVLGYFGMVGLLRVHCLLGDYHTGLKCLQPIDISQQGVYTIVIGSHITTIYHHGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQNRLLDETVNSQLREKYGEKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLTKLASHMEVDEPTLRTILITYKHKAHAVDSDGKVISNADVDFYIDDDMVHVVEFKPAKRYGDYFLRQVVKLEGVINEMDAIKLD 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0302 527 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 24 516 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal17g0302 527 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 31 527 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal17g0302 527 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 31 527 - -
Lal17g0302 527 Pfam RNA polymerase I-associated factor PAF67 118 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal17g0302 527 ProSiteProfiles PCI domain profile. 302 501 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0302 Lal-Chr17 1884671 1888998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0302 K15029 - gmx:100786533 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0302 17 1884671 1888998 Lal17g0302 17 1884671 1888998 ECH
Lal17g0302 17 1884671 1888998 Lal21g0407 21 2823626 2828197 LSH
Lal17g0302 17 1884671 1888998 Lal4g0276 4 1771960 1776221 LSH