Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0407 ATGGCTACCCACGACTACGAAGACGCACGCGCCGTCTCAGGCGGTGCCGGATACGATGACCACCGTCATCAACAACCACAAGACCAATTAGACTACGACCCGAACTTCGTACCAGATTCCGTTAAATCCTTCGTCGTTCACCTCTACCGTCACATTCGTGAAAAGAACGTCTACGAGATTCACCAAATGTACGAAACCTCATTCCACACACTCTCCGACCGTTTATTCAAGGACACGCCGTGGCCCTCGGTGGACGCGGTGGCGCATTACGTCGATAACGACCACGTTTTTTGCTTGCTCTACAAGGAGATGTGGTTTCGCCACCTCTACGCTCGTCTCAATCCTACGATACGTCAGCGTATTGATTCGTGGGACAATTATTGTTCTCTTTTTCAGGTTGTGCTACACGGTGTTGTTAACATGCAGCTTCCGAATCAGTGGCTTTGGGATATGGTGGATGAGTTCGTTTACCAGTTTCAAAGCTTCTGTCAGCACCGCGCGAAAATGAAGAACAAAACTGAGCAAGAGATTGTTCTCTTCAGACAGTTTGATCAGGCATGGAGTGTTTATGGTGTTCTCAACTTCTTGCAAGAACTTGTAGAGAAATCAAATATTATTCAGATTCTGGAGAATGAGAAGGAAGGGTTGGAACAGTTCACTTCTACAGATGGGTATGATTACAATGGAGGGAGTAACGTGTTGAAGGTTTTGGGGTATTTTGGCATCGTTGGTTTGCTGCGGGTGCATTGTCTTTTGGGAGATTATCATACCGGTCTCAAGTGCCTGCAACCTATTGATATTAGTCAACAGAGTGTTTACACCCTTGTTATTGGCAGCCACATTACTACCATTTATCACCATGGTTTTTCCAATCTTATGCTGCGCAGATATGTGGAGGCAATTCGTGAATTCAACAAAATTCTATTGTACATTTATAAGACGAAGCAGTATCATCAGAAATCGCCACAATATGAGCAGATACTGAAGAAGAATGAGCAAATGTACGCCTTGCTGGCAATTTGCCTTTCACTCTGCCCCCAAAGCAGGCTCGTCGATGAAACCGTGAGCTCTCAATTGCGAGAGAAGTATGGTGAAAAGATGATGATAATGCAAAGATACGATGATGAGGCATTTGCCATCTTTGATGAGCTCTTCTCGTATGCATGTCCAAAGTTTATTACTCCTTCAGCACCAAGCTTTGAGGAACCTCTAGTAAACTTCAACCAGGATGCTTATAGACTTCAATTGAAATTGTTCCTTTATGAAGCAAAGCAACAACAATTGTTATCAGGTGTCCGGACCTTCTTAAAAGTGTATTCGACAATCTCCCTTACAAAACTTGCAAGTTACATGGAAGTCGATGAACCTAACTTAAGGACTATCTTGATAACATACAAGCATAAGACACAGGCTGTTGATAGTGATGGAAAAGTTATCTCCAATGCTGACATCGATTTTTATATTAATGATGATATGGTTCATGTTGTAGAGTCCAAGCCAGCCAAACGGTATAGTGATTACTTCCTGCGTCAGGTTGTCAAGCTTGAAGGGGTGATCAACGAAGTGGACGCCATAAAGGTAGTTTAA 1587 0.4342 MATHDYEDARAVSGGAGYDDHRHQQPQDQLDYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYETSFHTLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYKEMWFRHLYARLNPTIRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQHRAKMKNKTEQEIVLFRQFDQAWSVYGVLNFLQELVEKSNIIQILENEKEGLEQFTSTDGYDYNGGSNVLKVLGYFGIVGLLRVHCLLGDYHTGLKCLQPIDISQQSVYTLVIGSHITTIYHHGFSNLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQSRLVDETVSSQLREKYGEKMMIMQRYDDEAFAIFDELFSYACPKFITPSAPSFEEPLVNFNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLTKLASYMEVDEPNLRTILITYKHKTQAVDSDGKVISNADIDFYINDDMVHVVESKPAKRYSDYFLRQVVKLEGVINEVDAIKVV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0407 528 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 24 517 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal21g0407 528 MobiDBLite consensus disorder prediction 1 28 - -
Lal21g0407 528 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 19 526 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal21g0407 528 MobiDBLite consensus disorder prediction 14 28 - -
Lal21g0407 528 Pfam RNA polymerase I-associated factor PAF67 119 514 IPR019382 GO:0003743|GO:0005737|GO:0005852
Lal21g0407 528 ProSiteProfiles PCI domain profile. 303 502 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0407 Lal-Chr21 2823626 2828197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0407 K15029 - gmx:100786533 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0407 21 2823626 2828197 Lal21g0407 21 2823626 2828197 ECH
Lal17g0302 17 1884671 1888998 Lal21g0407 21 2823626 2828197 LSH
Lal21g0407 21 2823626 2828197 Lal4g0276 4 1771960 1776221 LSH