Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0270 ATGAAGAACACCGAACGAATTGCTAATTTGGCTTTAGCAGGTTTAACCTTAGCACCACTGGTTGTGAAAGTAGATCCAAATTTAAATGTTACTTTGACAGCTTGCCTGGCTGTGTTCGTGGGCTGCTACCGTTCCGTCAAACCAACCCCACCAACTGAGACTATGTCCACTGAACATGCCATGCGTTTTCCCTTTGTTGGGAGTGCAATGTTGTTATCACTTTTCTTGCTCTTCAAGTTTCTCTCTAAGGACTTGGTGAACACTGTATTGACAGCCTACTTCTTTGTACTCGGGATTGTTGCACTTTCGGCAACATTGTTACCATCAATCAAACGTTTTCTGCCAAATCATTGGAATGAGAACCCCATAGTCTGGCGTTTTCCTTATTTCCGTTCCTTGGAGATTGAGTTTACAAAGGCCCAGATTGTCGCATCAATTCCTGGGACTTTTTTCTGTGTCTGGTATGCTTTGTCGAAGCATTGGCTGGCGAATAATATATTGGGTCTTGCTTTCTGTATTCAGGGAATTGAAATGCTTTCTCTTGGGTCTTTCAAGACTGGTGCTATTCTCTTGGTTGGTCTATTTGTGTATGACATTTTCTGGGTTTTTTTCACTCCTGTGATGGTTAGCGTTGCAAAATCATTTGATGCTCCAATAAAGCTTTTGTTCCCCACATCTGATTCTGCAAGGCCGTTTTCAATGCTTGGACTTGGTGATATTGTTATCCCTGCTTGTTTGGGAGTTATAGAGAGAGCAGACTGGAATGGAAAAAGGGAGGGTAGATGTGTGTCAAACTTCAATCTGTACCGGGAAAGAGTGATGTTCTTTTTGAAATATGAAATGTTTAGGCATGGCGTCAATATATGTATTTTTGTAGCATTGGCTTTGCGGTTTGATGTGTCTAGAGGAAAGCAGCCGCAGTATTTCAAGAGTGCATTTTTAGGATACACTTTTGGCTTGGTCCTCACAATTGTTGTGATGAACTGGTTTCAGGCTGCACAGCCTGCTCTGTTGTATATTGTACCTGCTGTAATTGGATTTTTAGCTGCCCATTGCATATGGAATGGTGATGTCAAACAGTTGTTGGAGTTCGATGAGTCAAAAACTGCCAATTCATCTGAAGAGGTTGATGCCAAATCTAACAAAAAGGTAGAATAA 1158 0.4154 MKNTERIANLALAGLTLAPLVVKVDPNLNVTLTACLAVFVGCYRSVKPTPPTETMSTEHAMRFPFVGSAMLLSLFLLFKFLSKDLVNTVLTAYFFVLGIVALSATLLPSIKRFLPNHWNENPIVWRFPYFRSLEIEFTKAQIVASIPGTFFCVWYALSKHWLANNILGLAFCIQGIEMLSLGSFKTGAILLVGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTSDSARPFSMLGLGDIVIPACLGVIERADWNGKREGRCVSNFNLYRERVMFFLKYEMFRHGVNICIFVALALRFDVSRGKQPQYFKSAFLGYTFGLVLTIVVMNWFQAAQPALLYIVPAVIGFLAAHCIWNGDVKQLLEFDESKTANSSEEVDAKSNKKVE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0270 385 PANTHER SIGNAL PEPTIDE PEPTIDASE 288 385 IPR007369 GO:0004190|GO:0016021
Lal4g0270 385 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 247 IPR007369 GO:0004190|GO:0016021
Lal4g0270 385 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 288 385 - -
Lal4g0270 385 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 1 247 - -
Lal4g0270 385 SMART psh_8 51 355 IPR006639 GO:0004190|GO:0016021
Lal4g0270 385 Pfam Signal peptide peptidase 290 367 IPR007369 GO:0004190|GO:0016021
Lal4g0270 385 Pfam Signal peptide peptidase 51 258 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0270 Lal-Chr4 1735068 1740836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0270 K09595 - gmx:100807073 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0298 17 1863287 1869621 Lal4g0270 4 1735068 1740836 LSH
Lal21g0401 21 2776491 2783057 Lal4g0270 4 1735068 1740836 LSH