Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0298 ATGAAGAACACCGAGCGATTTGCCAATTTGGCCTTAGCAGGTTTAACCTTAGCACCACTTGTTGTGAAAGTAGATCCAAATTTAAATGTTATTTTGACGGCTTCCTTGACTGTGTTTGTGGGCTGTTACCGTTCGGTCAAACCAACCCCACCAACTGAGACAATGTCCAGAGAACATGCCATGCGCTTTCCCTTTGTTGGGAGTGCAATGTTATTATCACTTTTCTTGCTCTTTAAGTTTCTGTCCAAGGACTTGGTGAACACTGTATTGACAGCCTACTTCTTTGTACTTGGGATTGTTGCACTTTCGGCAACATTGCTACCATCAATCAAACGTTTTCTGTCAAATCATTGGAATGAGAACCCCATAGTCTGGCGTTTTCCGTATTTCAGCTCCTTGGATATCGAGTTTACAAAGTCACAGATTGTGGCAGCTATTCCTGGGACTTTTTTCTGTGCCTGGTATGCTTTGCAGAAGCATTGGCTGGCAAATAACATATTAGGTCTTTCTTTCTGTATTCAGGTTTGGCGCTTAACCTTAATTGATACAAATGGCCCCCTTTGGTATTTTCAGGGAATTGAAATGCTTTCTCTTGGGTCTTTCAAGACTGGTGCTATTCTCTTGGCTGGTCTATTTGTATATGACATTTTCTGGGTTTTCTTCACTCCTGTGATGGTTAGCGTTGCAAAATCATTTGATGCTCCAATAAAGCTTTTGTTCCCCACATTTAATTCTGCAAGACCATTTTCTATGCTTGGACTTGGTGATATTGTTATCCCTGGTATTTTTGTAGCATTGGCTTTGCGGTTTGATGTTTCTAGAGGAAAACAGCCCCAGTATTTCAAGAGTGCATTTTTAGGATATGCTTTTGGCTTGGCCCTTACTATCGTTGTGATGAACTGGTTTCAAGCTGCACAGCCTGCTCTTTTGTATATTGTCCCCTCTGTATTAGGATCTTTGGCTGCTCATTGCATATGGAATGGTGACGTCAAACAGTTATTGGAGTTCGATGAGGCAAAGACTGCCAATTCATCTGAAGAAGTTGATGATAAATCTAGTAAAAAGGTTGAATAA 1074 0.4097 MKNTERFANLALAGLTLAPLVVKVDPNLNVILTASLTVFVGCYRSVKPTPPTETMSREHAMRFPFVGSAMLLSLFLLFKFLSKDLVNTVLTAYFFVLGIVALSATLLPSIKRFLSNHWNENPIVWRFPYFSSLDIEFTKSQIVAAIPGTFFCAWYALQKHWLANNILGLSFCIQVWRLTLIDTNGPLWYFQGIEMLSLGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTFNSARPFSMLGLGDIVIPGIFVALALRFDVSRGKQPQYFKSAFLGYAFGLALTIVVMNWFQAAQPALLYIVPSVLGSLAAHCIWNGDVKQLLEFDEAKTANSSEEVDDKSSKKVE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0298 357 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 357 IPR007369 GO:0004190|GO:0016021
Lal17g0298 357 Pfam Signal peptide peptidase 51 339 IPR007369 GO:0004190|GO:0016021
Lal17g0298 357 SMART psh_8 51 327 IPR006639 GO:0004190|GO:0016021
Lal17g0298 357 PANTHER SIGNAL PEPTIDE PEPTIDASE-RELATED 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0298 Lal-Chr17 1863287 1869621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0298 K09595 - gmx:100801697 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0298 17 1863287 1869621 Lal21g0401 21 2776491 2783057 LSH
Lal17g0298 17 1863287 1869621 Lal4g0270 4 1735068 1740836 LSH