Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0256 ATGGCAACAAAAGCAAAAGAGAGTAATGTTGTTGGGAAGGAGAAGAAAACCCCTTCTTCCATTACAAACACAAAAAAGACCACAAAACCATCCACAACAACAAACCCAAAAGACAAGACCACAACCTCAAACCCAACAACAGAGAAACAAGTCCCAAACTATCTGAAACCCACAATAAGCTCAAGGCTAGTTGAATCACACTCCTTCAATCTACCCAAAAGTGATGCCTCTAACAAACCCATTACAAACAGAAGAAGGTCTTTTGATAAGCCACAATCACCTTCAAGGTTACCAAAACAAACACACCCTTCTTCTCCTTATTCAAGACAACACAAAGCCCTTGTGTCCCCTGGCCCACGTGAGAGATCACTACCATTGCCTATTAAAAGCACTAACCCTTCCAAACCCATTCCACAGAAACTCTCAAAGACACCCAAGGAAGGAAAAATACACCAGCCAGCACTGTTTGCTAAGAGTGACAAGAAGAGTAGAAGCCATAATCCTTCTACCTTAATAACCTCTAACAAGTACAGAGTAACGAATGTTGAGAGTGGGCCAGAAGTTAAAGAAGCCATAAATGAAAAGGTTGAGGTTGAAGAAGTACAAAAGGTAGAGAAACAAGAAGAACAAGAGGATGAAACTAAGGCTGTATCTGAGATTATTGTACCTCATGTTGAGTATGAACATGAACATGAACATGAACATGATCATGAGGTTGAGCCATGTGATGAGTTTCATGCTCAAGCTGTTCATGATGAGAATGTAACTCCCATGGTGTCAGAAGAAGAAGCTGCAAAAGAAGAAGAAAATGAAGATAAGCATGATGAGCATGAGAATAGAAACCAAGAAGAGTGCAACAATATAAATGAGACAATCTCAGAAATTAAGCATTCTACAGCTGATGAAGAAGTTGAGGTCAAAGAAAAGGAGGAAAAAGAAGAAGGGCAAATAATAGAAGAGGGTAAGAAAAGTGAGAACAATAATGTGGTAGTGGAAGAAGAGAAAGAAGGTTTTGAAGGAGGAATAAGAGAAGAGGTTAATATGAAGAAGGAAGGAGAAGATGATGAAGAAGAAAATGTGGAGAGTGAAGTTAAAGAAGAAGAGTCAACACAACCTAAGGAACAAGTACAACATGGGAAGAAAGAGTGTCAAGTATCCAATGATGTGATAGAAGAAACTGCAAGCATGCTTATGGAAGCAAGAAAGAACAAGGTGAGAGCATTGGCTGGGGCATTTCAAACTGTCATTGATGATCAAACTAAATGA 1266 0.3926 MATKAKESNVVGKEKKTPSSITNTKKTTKPSTTTNPKDKTTTSNPTTEKQVPNYLKPTISSRLVESHSFNLPKSDASNKPITNRRRSFDKPQSPSRLPKQTHPSSPYSRQHKALVSPGPRERSLPLPIKSTNPSKPIPQKLSKTPKEGKIHQPALFAKSDKKSRSHNPSTLITSNKYRVTNVESGPEVKEAINEKVEVEEVQKVEKQEEQEDETKAVSEIIVPHVEYEHEHEHEHDHEVEPCDEFHAQAVHDENVTPMVSEEEAAKEEENEDKHDEHENRNQEECNNINETISEIKHSTADEEVEVKEKEEKEEGQIIEEGKKSENNNVVVEEEKEGFEGGIREEVNMKKEGEDDEEENVESEVKEEESTQPKEQVQHGKKECQVSNDVIEETASMLMEARKNKVRALAGAFQTVIDDQTK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0256 421 Coils Coil 274 294 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 14 78 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 270 284 - -
Lal4g0256 421 Pfam Plant calmodulin-binding domain 309 416 IPR012417 GO:0005516
Lal4g0256 421 Coils Coil 350 370 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 1 178 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 142 165 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 253 384 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 365 384 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 93 111 - -
Lal4g0256 421 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 420 - -
Lal4g0256 421 Coils Coil 189 209 - -
Lal4g0256 421 PANTHER EMB|CAB62594.1 1 420 - -
Lal4g0256 421 MobiDBLite consensus disorder prediction 295 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0256 Lal-Chr4 1654071 1655654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0256 - - lang:109327158 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0275 17 1721233 1723538 Lal4g0256 4 1654071 1655654 LSH
Lal21g0378 21 2571369 2572721 Lal4g0256 4 1654071 1655654 LSH