Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0378 ATGGCAACAAAAGCAAAAGAGAGTAATGTTGTTGGTAAGGAGAAGAAGGCCACTTCTTCTATCACAAACACAAAAAAGACCACAACAACAAACCCAATATATAAGGCCACAACCTCAAACCCAACAACAGAAAAACCAGTCCCAAACTATCTCAAACCCACAATAAGCTCACGCCTAGTTGAATCAAACTCCTTCAATCTCATAAAGAGTGATGCCCCAAAAACGCCTAGTATAAACAGAAGAAAATCTTTTGATAAACCACCATCACCTTCAAGGTTACCAAATCAATCACACCCTTCTCCTCCTTCTTCAAGACAACACAAAGCCCTTGTGTCCCCTGGCCCACGTAAGAGATCACTATCATTGCCACTTAAAAGCACTAACCATTCTAAGCCCATTCCACAGAAGCACTCAAAGACCCCCAAAGAAGGAAAAACACACCAGCCACCACTGTTTTCTAAGAGTGATAAGAAGAGTAGAAGCCCGAGTCCTTCTACTACTTCAACAACCACTAAGAAGGTACATAATGATGCTTCTTCTTCTGCTAGATCAACCAATGCTGAAAAGAGTACTGTTGCTGAAACTACTACAGAAGGGTTACATGTTGAAACGGAGCCAGAAGTTAAAGAAGGTATAAATGAAAAGGAAAAAAATGAGATTGAGGAATTAGAAAAGGTGGAGAAACAAGAAGAGGTTGAAAATAAGGCCAAATGTGATATTCCACCTTATGTTGAATCTGAACATGAAAATGAAAATGAAAATGAGCATGATCATGAGGTTGAGGAATCTGACCAGTTTCACGTTCATGTTGACCATGATGAGAAGTTAATTCCTACAGTGTCAGAAGTAGAAGCTGCTAAACAAGGGAAGAATGATAAGGATGAGAACAGAAACCAAGAAGAATGCAACAATATTAATGGGACAATCCCAGAAATTAATAACTCTACAACTGAAGAAGAAGTTGAGGTGACAGAAAAGGAAGGAGAAGGTGAGAAAAAGATAGAAGAGGGTCACAAAAGTGAGAATGATAATGAGGAAGAAGCAGTAGTTGAAGAAGAGAAAGAAGATGTTGAAGTAGGAGGAATGAGTGAAGATGTTAATGTGAAGAAAGAAGTACAAGATGATGATGATGAAGAAGAAAAAGAAGAAAAGATGGAGAGAGGAGTTGAAGAAGTGAATGGTGAAGAGTTAACAGAACCTATGCAAAAAGTGGAACATGGGATGAAGGAGGAGTCTCAGGTATCTAATGATGTGATAGAAGAGACTGCTAGCAAACTTTTGGAGGCAAGAAAGAACAAGGTGAGAGCATTGGCTGGTGCATTTCAAACTGTCATTGATCATCAAACTATTTGA 1353 0.3895 MATKAKESNVVGKEKKATSSITNTKKTTTTNPIYKATTSNPTTEKPVPNYLKPTISSRLVESNSFNLIKSDAPKTPSINRRKSFDKPPSPSRLPNQSHPSPPSSRQHKALVSPGPRKRSLSLPLKSTNHSKPIPQKHSKTPKEGKTHQPPLFSKSDKKSRSPSPSTTSTTTKKVHNDASSSARSTNAEKSTVAETTTEGLHVETEPEVKEGINEKEKNEIEELEKVEKQEEVENKAKCDIPPYVESEHENENENEHDHEVEESDQFHVHVDHDEKLIPTVSEVEAAKQGKNDKDENRNQEECNNINGTIPEINNSTTEEEVEVTEKEGEGEKKIEEGHKSENDNEEEAVVEEEKEDVEVGGMSEDVNVKKEVQDDDDEEEKEEKMERGVEEVNGEELTEPMQKVEHGMKEESQVSNDVIEETASKLLEARKNKVRALAGAFQTVIDHQTI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0378 450 MobiDBLite consensus disorder prediction 1 264 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 283 300 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 326 345 - -
Lal21g0378 450 Coils Coil 335 355 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 14 73 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 283 416 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 301 317 - -
Lal21g0378 450 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 449 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 385 416 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 155 198 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 200 264 - -
Lal21g0378 450 SMART CaM_binding_2 338 446 IPR012417 GO:0005516
Lal21g0378 450 Coils Coil 209 233 - -
Lal21g0378 450 Pfam Plant calmodulin-binding domain 333 445 IPR012417 GO:0005516
Lal21g0378 450 PANTHER EMB|CAB62594.1 1 449 - -
Lal21g0378 450 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0378 Lal-Chr21 2571369 2572721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0378 - - lang:109327158 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0275 17 1721233 1723538 Lal21g0378 21 2571369 2572721 LSH
Lal21g0378 21 2571369 2572721 Lal4g0256 4 1654071 1655654 LSH