Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0214 ATGGCTCCGATTAACATTCGGAAGGCGATTGGTGCGGTGAAGGACCAAACGAGTATTGGATTAGCGAAGGTGGCGAGCAACATGGCGCCGGATTTGGAGGTTGCGGTGGTGAAGGCGACGAGCCACCACAACGACCCTGCAAATGAGAAGTACGTGCGTGAGATCTTGAACTTGATGTCATTCTCGCGCAGCTACGTCCACGCGTGTGTTTCTGCGGTGTCGAAGCGTTTGGCGAAGACGCGCAATTGGATCGTGGCCCTGAAGGCTCTCATGCTTGTTCATAGGTTGATGAATGAAGGACCGGTTCTGTTTCAGGAGGAGATTTTGCATGCTACTAGAAGAGGAACAAAGCTTCTTAACATGTCTAATTTCAGGGACGAGGCTCATTCTACTTCATGGGATTATTCTGTTTTTCTTAGAACCTATGCTATGTACCTTGATCAACGACTTGAGTTGATGTTGTTTGATAGGAAGAGTGGTAGTGGTGGGAGTGCCGCGGATGATGGGGGGAGAGACAATTTTATATCACCGCCACCGCGGGCGTTTGAGTATGAGTATGGAGGTGAATTCAGAGGGGGAAGTCGTGGGAATGGGAATAGGACGAGGAGAACGAGGTCGTATGGTGATACGAGTGAAACCATGAGAAATGAAGAGAAGATGTTTGTGAGTGTGACTCCTTTGAGGGATATGAAACTTGAGAGGATTTTCAGGAAGATGGGTCATTTGCAGAGGCTTTTGGATAGGTTTTTGGCTAGTAGGCCTACTGGGTTGGCGAGGAATAATAGGATGGTTTTGATTGCATTGTATTCTGTTGTGAAGGAGAGTTTTCAACTGTATGCTGATATATGTGAGGTGTTGTCTTTATTGCTTGACAAATTCTTTGATATGGAGTACCAAGATTGCATCAAGACCTTTGATGCTTATACCAGATCGGCAAAGCAGATCGATGAGCTAATTGCGTTCTACAATTGGTGTAAGGAAACGGGTGTGGCGAGGTCATCAGAGTACCCTGAAGTTCAAAGGGTTACTGGTAAGTTGCTGGAGACACTGGAGGACTTTGCGAGAGATAAAGCAAAGAAGCCGAAAAGTCCAGAAAGGAAAAACCTGGAAACTCCACCGGTGGTAAAAGAAGAGGAGGAGCCCGTCCCAGATATGAATGAAATCAAGGCATTGCCTCCACCGGAGAATTACACCCCGCCTCCTCCCCCTGAGCCAGAGCCGGAGCCTAAACCCCAATTTACAGAGGACTTGGTGAATCTGAGATATGATGCAGATACTGCAGACGATCAGGTTAATAAATTTGCATTGGCACTTTTTGCTGATGGAGCAGCTAATAATGGAAATGGATCATGGGAAGCCTTCCCCTCAAATGGACAGCCAGAGGTAACTTCGGCATGGCAAACACCGGCAGCAGAACCTGGAAAAGCTGATTGGGAATTGGCTTTGGTAGAGACTGCTAGCAATCTATCAAAGCAGAAGGCTACTCTAGGCGGCGGACTTGATCCCTTATTGTTGACTGCGATGTATGATCAAGGAATGGTTAGGCAGCATGTGAGCATTGCCCAACTGAGTGGAGGGAGTTCAAGCAGTGTGGCATTGCCAGGACCGGGTACGACCACAACACCTGTCTTAGCTCTCCCGGCTCCTGATGGAACTGTGCAGGCAGTTAATCAGGATCCATTTGCAGCATCATTGAGCATTCCACCTCCCTCATATGTGCAATTGTCTGATATGGAAAAGAAGCAACAGTTGCTTGTGCAGGAGCAGCAGCTGTGGCAGCATTATGCAAGGGATGGGATGCAAGGACAATCTACTTTGACAAAACTCGGTGCTACCGGATCCTATGCCGGAGATCCCATGCCAGTGATGCCTTATGGAATGCCACCAGTCAATTGA 1896 0.4794 MAPINIRKAIGAVKDQTSIGLAKVASNMAPDLEVAVVKATSHHNDPANEKYVREILNLMSFSRSYVHACVSAVSKRLAKTRNWIVALKALMLVHRLMNEGPVLFQEEILHATRRGTKLLNMSNFRDEAHSTSWDYSVFLRTYAMYLDQRLELMLFDRKSGSGGSAADDGGRDNFISPPPRAFEYEYGGEFRGGSRGNGNRTRRTRSYGDTSETMRNEEKMFVSVTPLRDMKLERIFRKMGHLQRLLDRFLASRPTGLARNNRMVLIALYSVVKESFQLYADICEVLSLLLDKFFDMEYQDCIKTFDAYTRSAKQIDELIAFYNWCKETGVARSSEYPEVQRVTGKLLETLEDFARDKAKKPKSPERKNLETPPVVKEEEEPVPDMNEIKALPPPENYTPPPPPEPEPEPKPQFTEDLVNLRYDADTADDQVNKFALALFADGAANNGNGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKATLGGGLDPLLLTAMYDQGMVRQHVSIAQLSGGSSSSVALPGPGTTTTPVLALPAPDGTVQAVNQDPFAASLSIPPPSYVQLSDMEKKQQLLVQEQQLWQHYARDGMQGQSTLTKLGATGSYAGDPMPVMPYGMPPVN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0214 631 PANTHER ENTH/ANTH/VHS SUPERFAMILY PROTEIN-RELATED 1 616 - -
Lal4g0214 631 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Lal4g0214 631 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Lal4g0214 631 MobiDBLite consensus disorder prediction 191 210 - -
Lal4g0214 631 Gene3D ANTH domain 222 370 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal4g0214 631 Pfam ANTH domain 31 356 IPR011417 GO:0005543
Lal4g0214 631 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 616 IPR045192 GO:0048268|GO:0072583
Lal4g0214 631 SUPERFAMILY GAT-like domain 227 353 - -
Lal4g0214 631 MobiDBLite consensus disorder prediction 393 408 - -
Lal4g0214 631 MobiDBLite consensus disorder prediction 355 412 - -
Lal4g0214 631 MobiDBLite consensus disorder prediction 355 385 - -
Lal4g0214 631 CDD ANTH_N_AP180_plant 32 152 - -
Lal4g0214 631 Gene3D - 1 156 IPR008942 -
Lal4g0214 631 SMART enth_2 30 160 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0214 Lal-Chr4 1338363 1340258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0214 - - gmx:100803282 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0214 4 1338363 1340258 Lal4g0214 4 1338363 1340258 ECH
Lal17g0229 17 1421061 1425088 Lal4g0214 4 1338363 1340258 LSH
Lal21g0331 21 2211393 2213360 Lal4g0214 4 1338363 1340258 LSH