Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0331 ATGGCTCAGAGTACGATTCGAAAGGCGATTGGAGCGGTCAAGGATCAAACGAGTATCGGAATTGCGAAGGTATCGAGCAATTTGGCGCCGGAGTTGGAGGTTGCGGTGGTGAAGGCGACTAGCCACGACGATGATCCGGCGAGTGAGAAATACGTACGCGAGATATTGAATCTCATGTCTTACTCTCGTGGCTATGTTCACGCGTGTGTCTCCGCTGTGTCGAAGCGATTGGCGAAGACGCGCGACTGGATCGTGGCTTTGAAGGCTCTTGTGCTTGTTCACAGGTTGATGAATGAAGGACCCGTTCTGTTTCAGGAGGAGATTTTGTATGCTACCAGAAGAGGTACCAGGCTTCTTAATATGTCTGATTTCAGAGATGAGGCTCATTCTAGTTCATGGGATCATTCTGCTTTTGTTAGAACTTATGCTATGTATCTGGATCAACGACTTGAGTTGATGTTGTTTGATAGGAAAGGTGGCAGTGTTGTTGGTGGTTCTGGTTCTGATTCTGCTGCTGCTGATAGGTTTGTGGGGAGAGACAATTTTAGATCTCCGCCACCGCGGGCGATTGAGTATGAGTATGGAGGTGAATTCAGAGAGGAAAGTGGTGGGTATGGGAATGGGAATGGGATGAGGAGAACGAGGTCGTTTGGTGATACGAGTGAGACAGTTGGAAAAGAAGATAAGAGGATTGTGAGTGTAACTCCTTTGAGGGATATGAAACCGGAGAGGATTTTCGGGAAGATGGGTCATTTGCAGAGGCTTTTGGATCGATTCTTGGCTTGTAGGCCTACTGGGTTGGCGAAGAATAGTAGGATGATTTTGATTGCTCTGTATCCTGTTGTGAAGGAGAGCTTTCAGTTATATGCTGATATATGCGAGGCTCTTGCTGTGTTGCTTGACAAATTCTTTGATATGGAGTATCCGGATTGTGTTAAGGCCCTTGATGCTTATGCCAGTTCGGCAAAGCAGATCGATGAGCTCGTTGCGTTCTTCAATTGGTGTAAGGAAATGGGTGTGGCAAGGTCTTCTGAGTATCCAGAAGTTCAGAGGATTACTAGTAAGTTGCTGGAGACACTAGAGGAGTTTGTGAAGGATAGAGCCAAGAAGCCAAAAAGTCCAGAGAGGAAAAAGCTGGAAGCTCCACCGGTGGTAAAAGAAGAGGAGCCCGTACCAGATATGAATGAAATCAAGGCACTGCCTCCACCCGAGGATTACACCCCACCCTCTCCACCCAAGCCAGAGCCAGAGCCAGAGCCCAAGCCACAATTTACAGAGGACTTGGTCAATCTGAGAGATGATGCAGATACTGCAGATGATCAGGGCAATAAATTCGCTTTGGCACTCTTTGCTGGTGGAGCAGCTAATAATGGAAATGGATCATGGGAAGCCTTCCCATCAAATGGACATCCGGAAGTGACTTCGGCTTGGCATACGCCTGCCGCAGAACCTGGGAAGGCTGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTATCAAAGCAGAAGGCAACACTGGGTGGCGGGTTTGATCCCTTATTATTGACTGGAATGTATGATCAAGGAATTGTGAGGCAGCATGTGAGCACTGCCCAACTTAGTGGAGGGAGTGCAAGCAGTGTTGCATTGCCAGGACCGGGGAAGACCATCACACCTGTTTTAGCTCTCCCGGCCCCAGATGGAACCGTGAAGGCAGTTAATCAGGATCCATTTGCAGCATCATTGAGCATTCCACCACCCTCGTATGTGCAAATGTCTGACATGGAAAAGAAGCAGCAATTGCTCGCGCAGGAGCAGCAGCTGTGGCAGCATTATGCAAGGGATGGCATGCAAGGACAAGCTAGCTTGATCAAACTCGGTGGCCCTGGATACTATGTCGGAGGTCCCATGCCGGTGATGCCTTATGGAATGCCCCCGGTCAATGGAATGGGACCTCCCACCGGGTATTACCATTCTCCATACTGA 1968 0.4883 MAQSTIRKAIGAVKDQTSIGIAKVSSNLAPELEVAVVKATSHDDDPASEKYVREILNLMSYSRGYVHACVSAVSKRLAKTRDWIVALKALVLVHRLMNEGPVLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKGGSVVGGSGSDSAAADRFVGRDNFRSPPPRAIEYEYGGEFREESGGYGNGNGMRRTRSFGDTSETVGKEDKRIVSVTPLRDMKPERIFGKMGHLQRLLDRFLACRPTGLAKNSRMILIALYPVVKESFQLYADICEALAVLLDKFFDMEYPDCVKALDAYASSAKQIDELVAFFNWCKEMGVARSSEYPEVQRITSKLLETLEEFVKDRAKKPKSPERKKLEAPPVVKEEEPVPDMNEIKALPPPEDYTPPSPPKPEPEPEPKPQFTEDLVNLRDDADTADDQGNKFALALFAGGAANNGNGSWEAFPSNGHPEVTSAWHTPAAEPGKADWELALVETASNLSKQKATLGGGFDPLLLTGMYDQGIVRQHVSTAQLSGGSASSVALPGPGKTITPVLALPAPDGTVKAVNQDPFAASLSIPPPSYVQMSDMEKKQQLLAQEQQLWQHYARDGMQGQASLIKLGGPGYYVGGPMPVMPYGMPPVNGMGPPTGYYHSPY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0331 655 MobiDBLite consensus disorder prediction 402 418 - -
Lal21g0331 655 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Lal21g0331 655 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Lal21g0331 655 SUPERFAMILY GAT-like domain 236 366 - -
Lal21g0331 655 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 631 IPR045192 GO:0048268|GO:0072583
Lal21g0331 655 Pfam ANTH domain 31 366 IPR011417 GO:0005543
Lal21g0331 655 MobiDBLite consensus disorder prediction 367 394 - -
Lal21g0331 655 Gene3D - 3 156 IPR008942 -
Lal21g0331 655 SMART enth_2 30 160 IPR013809 -
Lal21g0331 655 Gene3D ANTH domain 229 379 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal21g0331 655 PANTHER - 5 631 - -
Lal21g0331 655 MobiDBLite consensus disorder prediction 367 424 - -
Lal21g0331 655 CDD ANTH_N_AP180_plant 32 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0331 Lal-Chr21 2211393 2213360 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0331 - - adu:107463239 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0331 21 2211393 2213360 Lal21g0331 21 2211393 2213360 ECH
Lal17g0229 17 1421061 1425088 Lal21g0331 21 2211393 2213360 LSH
Lal21g0331 21 2211393 2213360 Lal4g0214 4 1338363 1340258 LSH