Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1912 ATGATGGAAGCACTCGCTAGCTCTTGTTCCAAGGCCATTGTTAAGAGTCTAGGATCATATTTTCCTAGAGGTGGTGCTGCTTTTGTTTCTGATAGACCCAAAATTTGTTTCTCTTCAAATGAGAAAAAAGGCTGCAACTTTCAGTTCCTGAAACTTGTACAAAACAAGGGTATTTACCCAATTCATGCTGTGAAATCTGAAACTGAGAGTATGTTGCAGCTGGACTTGGACACTGAAAAGCTTGAAGCTCTACAAACAAATGAACTGAAGACCATCCATGTCAAATTTCAGTTACAAAAGGATTGCGCCTTCGGGGAACAATTTCTTTTAGTTGGGGATGATCCTATGTTTGGTTCATGGAACCCTTCAAATGCATTACCAATGACCTGGTCTGATGGTCATGTATGGACCACCCACCTAAACATACCTGCTGGAAAGGCAATCCAATTCAAGTTCATACTGAAAGGGAAAACAGGCGATATTATTTGGCAGCCAGGCCCGGATAGAATTTTGCACACTTGGGAGGCTATGACTAGAATAACTGTTTGTGAGGATTGGGAGAATGCTGAAGCTCAGAAACTAATACAAGAATATCAACATGACTACTCAAATGAGGTTGAATCAAATGCTGAACTTATCCAAACTCATGCAAAGGAGCAGATAATTTCCTTGGAGGAGATCATCAAGAATGTAGACCACATAATGACTGAAAGGAAAATGATGCAACAGAATGAAGAATCTTCAAAGAGCTCTGAAAATGATGACAAAATAGAAGCACTCAGACACAATAGAAAAGCTGCACCAGTCAAGAAACAGAAAAAGTCATAG 828 0.3986 MMEALASSCSKAIVKSLGSYFPRGGAAFVSDRPKICFSSNEKKGCNFQFLKLVQNKGIYPIHAVKSETESMLQLDLDTEKLEALQTNELKTIHVKFQLQKDCAFGEQFLLVGDDPMFGSWNPSNALPMTWSDGHVWTTHLNIPAGKAIQFKFILKGKTGDIIWQPGPDRILHTWEAMTRITVCEDWENAEAQKLIQEYQHDYSNEVESNAELIQTHAKEQIISLEEIIKNVDHIMTERKMMQQNEESSKSSENDDKIEALRHNRKAAPVKKQKKS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1912 275 Gene3D Immunoglobulins 89 187 IPR013783 -
Lal2g1912 275 Pfam Starch binding domain 92 178 IPR002044 GO:2001070
Lal2g1912 275 MobiDBLite consensus disorder prediction 240 265 - -
Lal2g1912 275 PANTHER OS01G0856900 PROTEIN 2 258 - -
Lal2g1912 275 MobiDBLite consensus disorder prediction 240 275 - -
Lal2g1912 275 PANTHER ALPHA-AMYLASE 2 258 - -
Lal2g1912 275 SMART CBM_20_2 91 183 IPR002044 GO:2001070
Lal2g1912 275 SUPERFAMILY Starch-binding domain-like 91 183 IPR013784 GO:0030246
Lal2g1912 275 CDD CBM20 94 186 - -
Lal2g1912 275 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 86 188 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1912 Lal-Chr2 21347546 21349060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1912 - - lang:109352639 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1912 2 21347546 21349060 Lal2g1912 2 21347546 21349060 ECH
Lal2g1912 2 21347546 21349060 Lal9g1651 9 18864810 18866841 LSH
Lal2g1912 2 21347546 21349060 Lal1g2227 1 24258353 24260319 LSH
Lal2g1912 2 21347546 21349060 Lal14g0217 14 2464277 2468303 PCT
Lal14g0217 14 2464277 2468303 Lal2g1912 2 21347546 21349060 PCT