Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2227 ATGGAAGCCCTCACTAGTTCTTATTCTAAGGCCATTGTTAAGAATGTAGGACCTTGTTTCCCTAATGCTTTTGTTTCTGATCGACCCAAAATTTGTTTCTTCTCAAATGTGAGAAAAGGATGCAACTTTCAGTTCCTCAAACTTGTCCAAAACAAGGGCATTTACCCAATTTATGCTGTCAAATTTGAAACTAAGAATATGTTGCAGTTGGACTTAGAGACTGTTAAGTTTCAAGGACAAAAAACAAATGAAATGAAGAACATCCATGTCAAGTTTCAGTTACAAAAAAATTGTGAGTTTGGGGAACAATTTCTTTTACTTGGGGATGATCCTATGCTTGGTTCATGGAATCCTTCAAATGCTTTACCAATGACTTGGTCTGATGGGCACGTATGGACCACCCACCTGAACATACCTGTTGGAAAATCAATCCAATTCAAATTCATACTGAAAGGGAAAAAAGGTGACATATTTTGGCAACCAGGACCAGATAGAATTTTGCACACATGGGAAGCTATGACTAGAGTAACTGTTTGTGAGGATTGGGACAATGCTGAATCTCAAAAAGTAATACAAGAATATCAGAATGACTCAAATAATGTAAAAGAGAAAACTTTTATTGTGGCAAAAGATATAGGTTCTTCAGAAGAGATTATGAAGAATGCAATACACAGAATGACTGAAAGGAAATTGATTCAGTTGAAAGAACAATTAGCAAAGAGACATGGAAATGATGCCAAAATACATATACACACACACAATGGAAAAGTTGCACCAATCAAGAAGCAGAAAAGGTCATAG 801 0.3596 MEALTSSYSKAIVKNVGPCFPNAFVSDRPKICFFSNVRKGCNFQFLKLVQNKGIYPIYAVKFETKNMLQLDLETVKFQGQKTNEMKNIHVKFQLQKNCEFGEQFLLLGDDPMLGSWNPSNALPMTWSDGHVWTTHLNIPVGKSIQFKFILKGKKGDIFWQPGPDRILHTWEAMTRVTVCEDWDNAESQKVIQEYQNDSNNVKEKTFIVAKDIGSSEEIMKNAIHRMTERKLIQLKEQLAKRHGNDAKIHIHTHNGKVAPIKKQKRS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2227 266 PANTHER OS01G0856900 PROTEIN 1 228 - -
Lal1g2227 266 PANTHER ALPHA-AMYLASE 1 228 - -
Lal1g2227 266 Coils Coil 184 204 - -
Lal1g2227 266 SMART CBM_20_2 87 179 IPR002044 GO:2001070
Lal1g2227 266 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 80 184 IPR002044 GO:2001070
Lal1g2227 266 SUPERFAMILY Starch-binding domain-like 88 180 IPR013784 GO:0030246
Lal1g2227 266 Gene3D Immunoglobulins 85 183 IPR013783 -
Lal1g2227 266 Pfam Starch binding domain 88 176 IPR002044 GO:2001070
Lal1g2227 266 CDD CBM20 90 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2227 Lal-Chr1 24258353 24260319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2227 - - lang:109352639 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2227 1 24258353 24260319 Lal1g2227 1 24258353 24260319 ECH
Lal2g1912 2 21347546 21349060 Lal1g2227 1 24258353 24260319 LSH
Lal9g1651 9 18864810 18866841 Lal1g2227 1 24258353 24260319 LSH
Lal1g2227 1 24258353 24260319 Lal14g0217 14 2464277 2468303 PCT
Lal14g0217 14 2464277 2468303 Lal1g2227 1 24258353 24260319 PCT