Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0217 ATGATGATGATGATGAAATCCCTTAGCAGCTCTTGTTCTAAAGCCATACTTCACAAGTCACTATCTTCATTTCCCTGTGTTACTTCTAAAGTTCATGTTTCTGATAGAACAGATTTTTGCTTCAACCTAACCTCAAAAAATGACTCCAACTATTGCTTCCTGAAACTGGTCCAAAACAACGGTATTGTTGTTCGTGCTGTGCCATCAAAAACCCAGGTGGATTTTGAAACTATAGAATCTGAATTGGAGACTGTAGATTCTCAAGATCAACAAACTGAAGAAAGTGAACAAACAAGTGAATCAAAATTTGTTCGTGTAACATTTCAGTTAGAAAAAAATTGCGACTTTGGTGAACAATTTCTAGTAGTTGGAGATGATCCTGTGCTTGGTTCGTGGGATCCGGCAAATGGCTTATCAATGACCTGGTCTGATGGGCATATATGGACTGTCGAGCTAGATATGCCTACTGGGAAATCAATCTTGTACAAGTTCATACTGAAGGGGAAAGCAGGTGACATTGTTTGGCAACCGGGCTCGGATCGAACTATTCAAACTTGGGCAACTACGAAAAGAATCATTGTTTGTGAGGATTGGGAGAATGATGAACTTTCAAAAATAATAGAGGAAGATCAAGTTGATAAAACAAATGAGGAAAGCCAGGTTGACCGAGAAATGTCAAGTTTTACTGAACATCTTGATAATCCTGAAGAGGGATTGGTATCTGATGTATCCAAAATATCAGGCATTGAAGATAGCCAAACTCATTCGGAGGAAAAACCGCCTGGTGAACCAGACCTGCTTCAAATCAATGATTATAGTATTTCTTCCCCGTCAGAGAAGCCGGTGGCTATTGTTGCAGAAAATATAGGTTCCTCAGAGGATCTCATTAACTGCAGTGAAGAATCGGCAGATAGTCCCGGAAATGATAATACCATACATGTTGGACACAATGGAATCGATGTACCAATAAAGAATCAGGAAAGGACATCTGTGGAGAGCAACTTATTCGATTTCGAAGGAAGTCCCGTTCTTGTAGTTGTACCTGACTTAACTACGCCCGTTGTGGCAAATGAAGAAGCAGGTTCGGGTGAAGTTCAAGAAAGTACTACCGTATACACTCCGATTGAAGCTTTTGAATCTAAGGACCAGAACATACCAGAGTTCACTAAGGAGCAAGAATTCAATGATGGCACACCCCCAGTGATAAACTCAACACTGAAAGAGCCAGAGCTGCTTCACAATGAATATGAAGAGCAGTCTCATTTAGCACCAGAAATGGAAGATAGGTCAATTTCCGAGCCAGTTGATGGTAATGTCGTGCAAAACGACATCGAATGGGGCCGTCAAACGGTACTGAAGTTCCTAACAAAACTTGGGTTGTTTTGA 1386 0.4076 MMMMMKSLSSSCSKAILHKSLSSFPCVTSKVHVSDRTDFCFNLTSKNDSNYCFLKLVQNNGIVVRAVPSKTQVDFETIESELETVDSQDQQTEESEQTSESKFVRVTFQLEKNCDFGEQFLVVGDDPVLGSWDPANGLSMTWSDGHIWTVELDMPTGKSILYKFILKGKAGDIVWQPGSDRTIQTWATTKRIIVCEDWENDELSKIIEEDQVDKTNEESQVDREMSSFTEHLDNPEEGLVSDVSKISGIEDSQTHSEEKPPGEPDLLQINDYSISSPSEKPVAIVAENIGSSEDLINCSEESADSPGNDNTIHVGHNGIDVPIKNQERTSVESNLFDFEGSPVLVVVPDLTTPVVANEEAGSGEVQESTTVYTPIEAFESKDQNIPEFTKEQEFNDGTPPVINSTLKEPELLHNEYEEQSHLAPEMEDRSISEPVDGNVVQNDIEWGRQTVLKFLTKLGLF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0217 461 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 98 200 IPR002044 GO:2001070
Lal14g0217 461 PANTHER ALPHA-AMYLASE 5 460 - -
Lal14g0217 461 CDD CBM20 105 198 - -
Lal14g0217 461 Pfam Starch binding domain 104 190 IPR002044 GO:2001070
Lal14g0217 461 PANTHER OS01G0856900 PROTEIN 5 460 - -
Lal14g0217 461 Gene3D Immunoglobulins 101 199 IPR013783 -
Lal14g0217 461 SUPERFAMILY Starch-binding domain-like 101 197 IPR013784 GO:0030246
Lal14g0217 461 SMART CBM_20_2 103 195 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0217 Lal-Chr14 2464277 2468303 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0217 - - lang:109362848 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0217 14 2464277 2468303 Lal14g0217 14 2464277 2468303 ECH
Lal2g1912 2 21347546 21349060 Lal14g0217 14 2464277 2468303 PCT
Lal9g1651 9 18864810 18866841 Lal14g0217 14 2464277 2468303 PCT
Lal1g2227 1 24258353 24260319 Lal14g0217 14 2464277 2468303 PCT
Lal14g0217 14 2464277 2468303 Lal2g1912 2 21347546 21349060 PCT
Lal14g0217 14 2464277 2468303 Lal9g1651 9 18864810 18866841 PCT
Lal14g0217 14 2464277 2468303 Lal1g2227 1 24258353 24260319 PCT