Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0351 ATGTATTTGCCAAGCAAGGTAATCATGGCAACCATGTTAGCTGTGGATGTTTGCATGTTTCAAACTGCAATCCAAAATCATTCAACTATTCCATCTATAGCGAAGCGCCCATCCTCCAATAGGCCTGTGAAGAGTGTTTCCAGATTTTTTGGCTTGAAATCATCCTCTTCATTTAGAGTGACTGCTATGGCTGCTTACAAGGTTAAGCTGATCGGCCCAGATGGAAAAGAGAATGAATTTGAGGCCCCGGGTGATACTTACCTCTTGGATGCAGCAGAGAATGCCGGAATTGAACTTCCTTATTCATGCCGTGCAGGAGCATGCTCTACCTGTGCTGGGAAGATTGTTTCCGGCCAGGTAGACCAGTCTGATGGCGCATTCCTCGATGACAGTCAATTGAGTGAGGGCTACCTGCTTACTTGTGTCTCCTATCCAACTTCAGACCTTGTCATTGAAACTCACAAGGAAGAAGCACTCTTCTGA 483 0.4576 MYLPSKVIMATMLAVDVCMFQTAIQNHSTIPSIAKRPSSNRPVKSVSRFFGLKSSSSFRVTAMAAYKVKLIGPDGKENEFEAPGDTYLLDAAENAGIELPYSCRAGACSTCAGKIVSGQVDQSDGAFLDDSQLSEGYLLTCVSYPTSDLVIETHKEEALF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0351 160 CDD fer2 68 152 IPR001041 GO:0051536
Lal2g0351 160 Pfam 2Fe-2S iron-sulfur cluster binding domain 73 146 IPR001041 GO:0051536
Lal2g0351 160 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 103 111 IPR006058 GO:0051537
Lal2g0351 160 PANTHER FERREDOXIN 9 160 - -
Lal2g0351 160 SUPERFAMILY 2Fe-2S ferredoxin-like 61 159 IPR036010 GO:0051536
Lal2g0351 160 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 66 157 IPR001041 GO:0051536
Lal2g0351 160 PANTHER FERREDOXIN 9 160 - -
Lal2g0351 160 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 64 159 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lal2g0351 160 Gene3D - 63 160 IPR012675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0351 Lal-Chr2 2113800 2114690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0351 K02639 - gmx:100785611 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0351 2 2113800 2114690 Lal2g0351 2 2113800 2114690 ECH
Lal1g0431 1 2691694 2692158 Lal2g0351 2 2113800 2114690 LSH
Lal2g0351 2 2113800 2114690 Lal9g0331 9 2212080 2213136 LSH