Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0431 ATGGCAACCATGTCAGTTGTGAATGTTTCTCCTTGTTGCATGTTTCAACCTGCAATCCAAAACCGATCCACTGTGGCAACCATAGTGAAGTGCCCTTTCTCCATTGGGTCTGTGAAGAGCGTTTCCAGATCTTTTCGCTTGAAGTCCTCTTCATTTAGAGTAACTGCTATGGCTTCTTACAAGGTTAAGCTGGTCGGCCCAGATGGAAAAGAGAATGAATTTGAGGCCCCCGATGATACATACATCTTGGATGCAGCAGAGAACGCTGGAATCGAACTTCCTTATTCGTGCCGTGCTGGAGCATGCTCTACTTGTGCTGGAAAGATTATTTCAGGTCAGGTGGATCAGTCTGATGGCTCATTCCTTGATGACAATCAACTGAAGGATGGCTATCTGCTTACCTGTGTCTCCTATCCGACTTCAGACCTTGTAATTCAAACTCACCAGGAGGAATCACTCTACTGA 465 0.4581 MATMSVVNVSPCCMFQPAIQNRSTVATIVKCPFSIGSVKSVSRSFRLKSSSFRVTAMASYKVKLVGPDGKENEFEAPDDTYILDAAENAGIELPYSCRAGACSTCAGKIISGQVDQSDGSFLDDNQLKDGYLLTCVSYPTSDLVIQTHQEESLY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0431 154 CDD fer2 62 146 IPR001041 GO:0051536
Lal1g0431 154 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 97 105 IPR006058 GO:0051537
Lal1g0431 154 Pfam 2Fe-2S iron-sulfur cluster binding domain 67 140 IPR001041 GO:0051536
Lal1g0431 154 PANTHER FERREDOXIN 4 154 - -
Lal1g0431 154 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 58 154 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lal1g0431 154 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 60 151 IPR001041 GO:0051536
Lal1g0431 154 PANTHER FERREDOXIN 4 154 - -
Lal1g0431 154 Gene3D - 57 154 IPR012675 -
Lal1g0431 154 SUPERFAMILY 2Fe-2S ferredoxin-like 44 152 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0431 Lal-Chr1 2691694 2692158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0431 K02639 - gmx:100785611 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0431 1 2691694 2692158 Lal1g0431 1 2691694 2692158 ECH
Lal1g0431 1 2691694 2692158 Lal2g0351 2 2113800 2114690 LSH
Lal1g0431 1 2691694 2692158 Lal9g0331 9 2212080 2213136 LSH