Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0325 ATGGTGGTCACTTTTTTCTTCTTCTTGGCGCTCTTTGCGTTGGTTTCTGGGTCTCCCATGACTTTGACACTTGAAAGAGCATTTCCTTCAAATCATGGAATGGAGTTGAGTCGGCTGAGGGCGTGGGACATGGACAGACATCGAAGGATGTTACAGTCCACTAACTATATTGTCGATTTCCCAGTTAAAGGAAACTTCGATCCAGCCACAGTTGGGCTTTACTATACGAAGATTCTATTGGGTTCTCCTCCAAGGGAATTCCACGTACAGATTGACACTGGTAGTGATGTTCTGTGGGTTAGTTGTGGGTCTTGCAATGGTTGTCCCCAAACAAGCGGGCTCGAAATTCAACTCAATTATTTTGACCCTGGGAGTTCATCAACATCTTCATTGATCTCTTGTTTAGACCAAAGGTGCAGGAATGGAGTGCAGTCACAAGATGCCATATGTTCCAGTCAGAACAACCAGTGCACCTACACTTTCCAGTACGGAGATGGTAGCGGTACATCGGGATACTACGTTTCAGACTTGATGCATTTTGCTAGTATTTCAGAGGGATCCGTGACATCAAATTATTCTGCCCCAATAGTTTTTGGTTGTAGCAACCTGCAGACCGGAGACTTGACAAAGACCACAAGAGCAGTTGATGGGATATTCGGATTTGGGCAACAAGACATGTCTGTTATCTCACAGCTCTACTCACAAGGAATAGCGCCAAAAGTGTTCTCTCATTGCCTCAAAGGAGATAATAGCGGTGGGGGCATATTGGTTCTTGGTGAGATTGTGGAGCCAAATATGATTTATAGTCCACTTGTTCCATCACAGCCTCATTACAATTTAATTCTACAGAGCATCTCTGTCAATGGCCAAATGTTGCAAATTGATCCTTCAGTTTTTGCAACATCAAACAACAGAGGTACCATAATTGATTCTGGAACGACGTTGGCATACCTTGCAGAAGAAGCCTACAATCCCGTTATTGATGCGATTACAGCTGCAATTCCACAATCTATACGCACAGTTCTTTCCAAGGGGAATCAGTGTTACTTGATATCCACTAGTGTTGCTGACATTTTTCCTCAAGTAAGTCTGAATTTTGCTAATGGTGCATCTCTAGTTTTAAGACCACAAGACTACCTTATACTGGAGAATCCTATTGTTGATGGAGCAGTGTGGTGCCTTGGCTTTCAGAAAATTCAGGGTCAAGATATAACAATTCTAGGAGACCTTGTATTAAAAGACAAAATTTTTGTCTATGATCTTGCTGGTCAGCGAATTGGATGGACCAATTATGATTGTTCGTTGTCGGTTAATGTCTCTGCATCAACTAGTACTGGCAGAAGTGAGTTTGTCAATGCAGGGGAACTAAATGGCAGTACTTCTTTATGGGATAGAACTCACAAGTTCACAAAGGTGCGGGTCCTGGCATTCTTGATGCACATGGCATTGATTTGCTGCTTTGTATTTTTGTAG 1473 0.427 MVVTFFFFLALFALVSGSPMTLTLERAFPSNHGMELSRLRAWDMDRHRRMLQSTNYIVDFPVKGNFDPATVGLYYTKILLGSPPREFHVQIDTGSDVLWVSCGSCNGCPQTSGLEIQLNYFDPGSSSTSSLISCLDQRCRNGVQSQDAICSSQNNQCTYTFQYGDGSGTSGYYVSDLMHFASISEGSVTSNYSAPIVFGCSNLQTGDLTKTTRAVDGIFGFGQQDMSVISQLYSQGIAPKVFSHCLKGDNSGGGILVLGEIVEPNMIYSPLVPSQPHYNLILQSISVNGQMLQIDPSVFATSNNRGTIIDSGTTLAYLAEEAYNPVIDAITAAIPQSIRTVLSKGNQCYLISTSVADIFPQVSLNFANGASLVLRPQDYLILENPIVDGAVWCLGFQKIQGQDITILGDLVLKDKIFVYDLAGQRIGWTNYDCSLSVNVSASTSTGRSEFVNAGELNGSTSLWDRTHKFTKVRVLAFLMHMALICCFVFL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0325 490 PRINTS Pepsin (A1) aspartic protease family signature 80 100 IPR001461 GO:0004190|GO:0006508
Lal2g0325 490 PRINTS Pepsin (A1) aspartic protease family signature 307 318 IPR001461 GO:0004190|GO:0006508
Lal2g0325 490 PRINTS Pepsin (A1) aspartic protease family signature 405 420 IPR001461 GO:0004190|GO:0006508
Lal2g0325 490 CDD pepsin_A_like_plant 74 433 IPR034161 -
Lal2g0325 490 Gene3D Acid Proteases 261 440 IPR021109 -
Lal2g0325 490 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 450 - -
Lal2g0325 490 Pfam Xylanase inhibitor C-terminal 278 429 IPR032799 -
Lal2g0325 490 SUPERFAMILY Acid proteases 71 436 IPR021109 -
Lal2g0325 490 Gene3D Acid Proteases 49 260 IPR021109 -
Lal2g0325 490 ProSiteProfiles Peptidase family A1 domain profile. 74 429 IPR033121 -
Lal2g0325 490 PANTHER ASPARTYL PROTEASES 4 450 IPR001461 GO:0004190|GO:0006508
Lal2g0325 490 Pfam Xylanase inhibitor N-terminal 74 259 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0325 Lal-Chr2 1969784 1973798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0325 48 434 Miscellaneous Gene Families AT1G44130 27.160 1.35e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0325 - K00924 gmx:100811632 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0214 25 1456836 1462007 Lal2g0325 2 1969784 1973798 PCT
Lal10g1211 10 18497712 18501602 Lal2g0325 2 1969784 1973798 PCT
Lal2g0325 2 1969784 1973798 Lal25g0214 25 1456836 1462007 PCT
Lal2g0325 2 1969784 1973798 Lal10g1211 10 18497712 18501602 PCT