Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0214 ATGGCGGCTGTTTTTTTCATTTACGCGGTGGTGGTTATTTTGACGGTGGCGGTTGTTTCTGGATCTCCGGTGACTCTAACACTGGAGAGAGCGTTTTCTTCGAATCATGGAGTGGAATTGAGTCAGCTTAGAGTTCGAGATATGTTCCGGCATAGAAGAATTTTGCAATCTTCTAATGGTGGCGTTGTTGATTTTAATGTTCAAGGCACTTCCAATCCATTTGATGTTGGGCTCTACTTCACGAAGGTGCAGTTAGGTACTCCTCCAATAGAATTCAATGTGCAGATTGACACTGGCAGTGATGTTCTCTGGGTTAGTTGCAACCCCTGCAATGGTTGTCCCCATACAAGTGGGCTTCCGATTAAACTCAATTTTTTTAACCCCGGGAGTTCATCGACATCTTCGTTAATATCTTGTTCTGACCAGAGGTGCAATAGTGGAGTACAAACATCAGATGCCAGCTGTTCCAGTCAGAACAACCAGTGCTCTTACAACTTCCAATATGGAGATGGCAGCGGGACATCAGGCTATTATGTATCCGATTATATGCATTTTAGCACTCTTTTTGAGCGATCCATGACTACAACCTCGTCAGCATCTGTAGTTTTTGGTTGTAGCAACCAGCAGACCGGGGACTTGACAAAGGCTGATAGAGCTGTTGATGGAATATTTGGATTTGGGCAACAAGGCATGTCTGTCATCTCCCAACTCTCATCCCAAGGAATAGCTCCAGGAGTGTTCTCTCATTGTCTGAAAGGAGATAACAGTGGAGGAGGAATACTGGTTTTGGGTGAGATCGTGGAACCAAACATAGTTTATACACCACTTGTTCCATCACAGCCCCATTACAATATAAATCTGCAGAGCATCTCTGTCAATGGGCAGACATTGCAAATTGATTCATCCGTTTTTGCTACATCAAACAGCAGAGGTACCATTGTTGATTCTGGAACAACTTTGGCATACCTTGCAGAAGAGGCTTATGATCCCTTTGTCAATGCGATTACAGCTGCAATTCCACCATCTGTACGCACTGTTGCTTCCAAAGGAACTCAATGTTACATAATCACATCCAGTGTCTCAGATGCTTTTCCTCAAGTAAGTCTTAATTTTGCTGGTGGCACATCAATGGTTTTAGGACCTCAGGACTACCTAATACAGCAGAATGCCGTGGCATCACTGTGGTGTATGGGCTTTCAGAAAATCCAGGGTCAAGGGGTAACAATTTTAGGAGACCTTGTATTAAAGGACAAAATTTTTGTTTATGATTTGGCTGGTCAACGCATTGGATGGGCTAAATATGACTGTTCTTTATCGGTTAATGTCTCTGCAACAACGGGCACGGGCCGAAGCGAATTTGTTAATGCTAAAGAGCGAAGTAGAAGCACTTCTTTGCAAGATGAACTTTACAAGTTGACAAAGATGGGACTTTTGGCTTTCTTCTTGCACATAACACTGATTTTCTGCTCTGTTTTATAG 1479 0.4314 MAAVFFIYAVVVILTVAVVSGSPVTLTLERAFSSNHGVELSQLRVRDMFRHRRILQSSNGGVVDFNVQGTSNPFDVGLYFTKVQLGTPPIEFNVQIDTGSDVLWVSCNPCNGCPHTSGLPIKLNFFNPGSSSTSSLISCSDQRCNSGVQTSDASCSSQNNQCSYNFQYGDGSGTSGYYVSDYMHFSTLFERSMTTTSSASVVFGCSNQQTGDLTKADRAVDGIFGFGQQGMSVISQLSSQGIAPGVFSHCLKGDNSGGGILVLGEIVEPNIVYTPLVPSQPHYNINLQSISVNGQTLQIDSSVFATSNSRGTIVDSGTTLAYLAEEAYDPFVNAITAAIPPSVRTVASKGTQCYIITSSVSDAFPQVSLNFAGGTSMVLGPQDYLIQQNAVASLWCMGFQKIQGQGVTILGDLVLKDKIFVYDLAGQRIGWAKYDCSLSVNVSATTGTGRSEFVNAKERSRSTSLQDELYKLTKMGLLAFFLHITLIFCSVL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0214 492 CDD pepsin_A_like_plant 79 436 IPR034161 -
Lal25g0214 492 Pfam Xylanase inhibitor N-terminal 79 264 IPR032861 -
Lal25g0214 492 Gene3D Acid Proteases 266 443 IPR021109 -
Lal25g0214 492 PRINTS Pepsin (A1) aspartic protease family signature 85 105 IPR001461 GO:0004190|GO:0006508
Lal25g0214 492 PRINTS Pepsin (A1) aspartic protease family signature 312 323 IPR001461 GO:0004190|GO:0006508
Lal25g0214 492 PRINTS Pepsin (A1) aspartic protease family signature 408 423 IPR001461 GO:0004190|GO:0006508
Lal25g0214 492 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 453 - -
Lal25g0214 492 Pfam Xylanase inhibitor C-terminal 282 432 IPR032799 -
Lal25g0214 492 SUPERFAMILY Acid proteases 73 439 IPR021109 -
Lal25g0214 492 PANTHER ASPARTYL PROTEASES 5 453 IPR001461 GO:0004190|GO:0006508
Lal25g0214 492 ProSiteProfiles Peptidase family A1 domain profile. 79 432 IPR033121 -
Lal25g0214 492 Gene3D Acid Proteases 58 265 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0214 Lal-Chr25 1456836 1462007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0214 52 437 Miscellaneous Gene Families AT1G44130 27.612 9.03e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0214 - K00924 lang:109351129 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0214 25 1456836 1462007 Lal25g0214 25 1456836 1462007 ECH
Lal25g0214 25 1456836 1462007 Lal10g1211 10 18497712 18501602 LSH
Lal25g0214 25 1456836 1462007 Lal2g0325 2 1969784 1973798 PCT
Lal2g0325 2 1969784 1973798 Lal25g0214 25 1456836 1462007 PCT