Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0240 ATGGCAGCCAATTCTTCTAATGGAGATCACACATCATCAAAGCAACCTCCTCCGCCATCTCCTTTGCGTTTTTCCAAATTCTTTCAGTCCAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGTTCTCACCTAGTCGACAGGTTGATGGAAAATGAAAAAAATGAGGTAATTGTTGCTGACAACTACTTCACTGGGTCAAAGGACAACCTCAAAAAATGGATCGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAGCCTTTGTTGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCCGCTTCCCCTATTTTCTACAAATATAATCCCGTGAAGACCATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCTAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGACCCTCTTATCCATCCCCAACCTGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGATGAAGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCACGGACTAGAAATTCGCATTGCGAGAATCTTCAACACATATGGACCGCGCATGAATATTGATGATGGTCGTGTTGTCAGCAACTTCATTGCTCAAGCACTTCGTGGTGAATCCTTGACAGTGCAATCTCCTGGAACTCAAACTCGCAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTAATGGGTGGCTCAGACACTGGACCAATCAATCTTGGAAACCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACTGTGAAGGAGCTTATTAACCCAGATGTTGAGATAAAGATAGTAGAGAACACTCCTGATGATCCACGACAGAGAAAACCAGACATAACTAAAGCAAAAGCATTGCTTGACTGGGAACCACAGATCAAATTGCGTGATGGGCTTCCTCTCATGGAAGAGGATTTCCGTTTGAGGCTTGGGGTTGACAAAAAGCATTAA 1038 0.4393 MAANSSNGDHTSSKQPPPPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMLELAETVKELINPDVEIKIVENTPDDPRQRKPDITKAKALLDWEPQIKLRDGLPLMEEDFRLRLGVDKKH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0240 345 CDD UGD_SDR_e 32 336 - -
Lal2g0240 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Lal2g0240 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 336 IPR036291 -
Lal2g0240 345 MobiDBLite consensus disorder prediction 1 21 - -
Lal2g0240 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 344 - -
Lal2g0240 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 344 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lal2g0240 345 Gene3D - 31 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0240 Lal-Chr2 1401210 1406406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0240 29 344 Miscellaneous Gene Families AT1G02000 24.217 2.64e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0240 K08678 - gmx:100790835 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0240 2 1401210 1406406 Lal2g0240 2 1401210 1406406 ECH
Lal1g0335 1 2017152 2021099 Lal2g0240 2 1401210 1406406 LSH
Lal25g0150 25 946889 951653 Lal2g0240 2 1401210 1406406 PCT