Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0150 ATGGAAAGCAATTCTTCTAATGGAAATCACCAAACAACAACAAAGCAACCTCCCATGCCATCTCCTTTGCGTTTTTCCAAATTCTTCCAGCCCAACTTGAGAATTTTGGTTACTGGAGGAGCTGGATTCATTGGGTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTTATTGTTGCTGATAACTACTTTACTGGATCCAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGACGTCACGGAACCTTTGTTCGTTGAAGTTGATCAGATCTACCATCTTGCATGCCCTGCATCTCCTATTTTCTACAAGTACAATCCAGTAAAGACAATAAAAACAAATGTGATTGGCACACTGAACATGCTTGGCCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCGACTTCAGAGGTGTATGGAGATCCTCTTGTGCATCCCCAACCTGAATCCTATTGGGGAAATGTTAATCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAACATGGGCTAGAAATACGAATTGCTAGAATCTTTAACACATATGGGCCACGCATGAATATTGATGATGGGCGTGTTGTTAGCAACTTCATTGCTCAAGCACTTCGTGATGAACCCTTGACTGTCCAATCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACCTGGTCGATGGCCTTATCCGTCTCATGGAAGGATCGAACACAGGGCCAATCAACCTTGGAAACCCAGGTGAATATACAATGACTGAACTTGCAGAGACAGTGAAGGAACTTATTAATCCAAATGTGCATATCAAGACAGTGGACAACACTCCTGATGATCCTCAACAGAGAAAACCGGACATAACAAAAGCAAAGGAACTGTTAGGCTGGGAACCGAAGGTTAAGTTGCGCGACGGTCTTCCTCTTATGGAAGATGATTTCCGTCTAAGGCTCGGAGTTGAGAAAATCAAAAGCAGTTAA 1047 0.426 MESNSSNGNHQTTTKQPPMPSPLRFSKFFQPNLRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRDEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGSNTGPINLGNPGEYTMTELAETVKELINPNVHIKTVDNTPDDPQQRKPDITKAKELLGWEPKVKLRDGLPLMEDDFRLRLGVEKIKSS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0150 348 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 344 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lal25g0150 348 MobiDBLite consensus disorder prediction 1 20 - -
Lal25g0150 348 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 344 - -
Lal25g0150 348 CDD UGD_SDR_e 34 337 - -
Lal25g0150 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 337 IPR036291 -
Lal25g0150 348 MobiDBLite consensus disorder prediction 1 22 - -
Lal25g0150 348 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
Lal25g0150 348 Gene3D - 32 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0150 Lal-Chr25 946889 951653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0150 33 329 Miscellaneous Gene Families AT4G00110 24.924 8.53e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0150 K08678 - gmx:100790835 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0150 25 946889 951653 Lal25g0150 25 946889 951653 ECH
Lal1g0335 1 2017152 2021099 Lal25g0150 25 946889 951653 ECH
Lal25g0150 25 946889 951653 Lal1g0335 1 2017152 2021099 PCT
Lal25g0150 25 946889 951653 Lal2g0240 2 1401210 1406406 PCT