Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0220 ATGGGAAGCCCCAAGAAGAATGAAGAAAGTAAGGGTTTTTTTGCCGCCATGTCTTCCGGCTTGTCCATGTTCAGCAACGCTATGCACCGATCTGTCAATGGGATGTTGGGGTATGAAGGCGTAGAAGTAATAAATCCAGAGGGAGGTAAAGATGATGCAGAGGAGGAAGCTCACAGAGGAAGATGGAGAAAAGAGGAAAGAGATGGTTACTGGAAGATGATGCAAAAATATATTGGGTCAGATGTAACGTCAATGGTGACACTACCAGTTATTATCTTTGAACCAATGACGATGCTCCAGAAAATGGCCGAGTTGATGGAGTACTCTTACTTGTTAGATAAGGCAGATGAATCAGAGGATCCATATATGCGGTTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCGTACCAACGAACCTGGAAGCCTTTTAACCCTATCCTGGGAGAGACTTATGAAATGGCTAACTATGGTGGAATTACATTTCTTTCAGAACAGGTGAGTCACCATCCCCCAATGAGTGCAGGACATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAATTAAAAACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCCGTTGGAAGAACGCGTGTGACACTCAAGAGGGATGGTGTAGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTCACAACCTGATATTTGGCCGGACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCTGTACTATACTTTCAACCATGTGGATGGTTTGGTACTGGCCGCTATGAAGTGGATGGATATATTTATAGTTCTTATGAGGAACCTAAAATATTAATGACCGGGAAATGGAATGAGAAAATGAGTTATCAACCTTGTGATTCAGATGGAGAGCCTCTTCCAGAGACAGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCAAATGATAAATTCCAGTATACACATTTTGCTCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAGTTGCTTGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCTGGGAATGAAAAGAGCAGTTTGGAGGAGAAGCAGCGTGCTGAAAAGAGAATCCGAGAAGCCAAAGGTCAGAACTTCACACCAAGATGGTTTGATTTAACTGAAGAAGTGACGGCAACTCCTTGGGGAGATTTGGAAATCTACCAATATAATGGTAAATACACCGAACATCGGGCTGTTGTAGATAACTCAGGCAGCGTTGATGGTGGTGATGTTAAATCAATTGAATTCAATCCATGGCAGTATGGTAACTTGTCCACAGAATGA 1374 0.4207 MGSPKKNEESKGFFAAMSSGLSMFSNAMHRSVNGMLGYEGVEVINPEGGKDDAEEEAHRGRWRKEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDKADESEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMANYGGITFLSEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGTGRYEVDGYIYSSYEEPKILMTGKWNEKMSYQPCDSDGEPLPETELKEVWHVADVPPNDKFQYTHFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGNEKSSLEEKQRAEKRIREAKGQNFTPRWFDLTEEVTATPWGDLEIYQYNGKYTEHRAVVDNSGSVDGGDVKSIEFNPWQYGNLSTE 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0220 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 454 IPR000648 GO:0008289
Lal2g0220 457 Coils Coil 373 393 - -
Lal2g0220 457 MobiDBLite consensus disorder prediction 372 388 - -
Lal2g0220 457 MobiDBLite consensus disorder prediction 364 388 - -
Lal2g0220 457 Gene3D - 359 439 - -
Lal2g0220 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 454 - -
Lal2g0220 457 Pfam Oxysterol-binding protein 70 427 IPR000648 GO:0008289
Lal2g0220 457 SUPERFAMILY Oxysterol-binding protein-like 64 435 IPR037239 -
Lal2g0220 457 Gene3D - 151 328 - -
Lal2g0220 457 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0220 Lal-Chr2 1286295 1292552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0220 - - gmx:100779808 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0220 2 1286295 1292552 Lal2g0220 2 1286295 1292552 ECH
Lal1g0318 1 1940308 1944937 Lal2g0220 2 1286295 1292552 LSH
Lal25g0139 25 869450 875109 Lal2g0220 2 1286295 1292552 PCT
Lal2g0220 2 1286295 1292552 Lal25g0139 25 869450 875109 PCT