Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0318 ATGGGTAGCCCCAAGAAAAATGAAGAAAGTAAGGGTTTTTTTGCCGCCATGTCTTCCGGCTTGTCCATGTTCAGCAACGCTATGCATCGATCTGTCAACGGGATGCTGGGGTATGAAGGTGTAGAAGTAGTAAATCCAGAGGGAGGTAAAGACGATGCAGAGGAGGAAGCTCAGAGAGGAAGATGGAGACAAGAGGAAAGGGATAGTTACTGGAAGATGATGCAAAAATATATTGGCTCCGATGTAACATCAATGGTGACACTACCAGTTATTATCTTCGAACCAATGACGATGCTCCAGAAAATGGCCGAGTTAATGGAGTACTCCTACTTGTTAGACCGGGCAGATGAATCAGAAGATCCATACATGCGGTTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGGCTAACCATGGTGGGATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCAGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACGCGTGTGACGCTCAAGAGGGATGGTGTAGTCTTAGATTTGGTGCCACCTCCTACTAAGGTTCACAACCTGATATTTGGCCGGACTTGGATTGATTCACCTGGGGAAATGGTAATGACAAATTTGACAACTGGAGACAAAGCTGTTCTATACTTTCAACCATGTGGATGGTTTGGTACTGGTCGCTATGAAGTGGATGGATATATTTATAATTCCTCTGAAGAACCTAAAATGTTAATGACCGGAAAGTGGAATGAAAGAATGAGTTATCAACCTTGTGATTCAGATGGAGAGCCTCTTCCAGAGACAGAAATGAAAGAGGTTTGGCATGTTGCCGATGTTCCACCAAATGATAAATTCCAGTATACATATTTTGCTCATAAAATAAACAGCTTTGACACTGCTCCTGGAAAGTTGCTTGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAAATGGGTGATCTGTCAAAAGCTGGGAATGAAAAGAGCAGTTTGGAGGAGAAGCAGCGCACTGAAAAGAGAAACCGAGAAGCCAAAGGGCATAACTTTAGACCAAGATGGTTTGATTTAACTGAAGAAGTGACACCAACTCCTTGGGGAGATTTGGAGATCTACCAATATAATGGCAAATACACTCAACATCGAGCTGCTGTTGATAACTCAGGCGGCGGTGATGTTGACGTTGACGTTAGTTCAATTGAGTTCAATCCATGGCAGTATGGTAACTTGTCTACTGAATGA 1377 0.4277 MGSPKKNEESKGFFAAMSSGLSMFSNAMHRSVNGMLGYEGVEVVNPEGGKDDAEEEAQRGRWRQEERDSYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDRADESEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGEMVMTNLTTGDKAVLYFQPCGWFGTGRYEVDGYIYNSSEEPKMLMTGKWNERMSYQPCDSDGEPLPETEMKEVWHVADVPPNDKFQYTYFAHKINSFDTAPGKLLASDSRLRPDRYALEMGDLSKAGNEKSSLEEKQRTEKRNREAKGHNFRPRWFDLTEEVTPTPWGDLEIYQYNGKYTQHRAAVDNSGGGDVDVDVSSIEFNPWQYGNLSTE 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0318 458 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 455 - -
Lal1g0318 458 SUPERFAMILY Oxysterol-binding protein-like 64 435 IPR037239 -
Lal1g0318 458 Gene3D - 151 329 - -
Lal1g0318 458 MobiDBLite consensus disorder prediction 364 391 - -
Lal1g0318 458 Pfam Oxysterol-binding protein 69 427 IPR000648 GO:0008289
Lal1g0318 458 MobiDBLite consensus disorder prediction 372 391 - -
Lal1g0318 458 Gene3D - 359 437 - -
Lal1g0318 458 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 455 IPR000648 GO:0008289
Lal1g0318 458 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0318 Lal-Chr1 1940308 1944937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0318 - - gmx:100779808 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0318 1 1940308 1944937 Lal1g0318 1 1940308 1944937 ECH
Lal1g0318 1 1940308 1944937 Lal2g0220 2 1286295 1292552 LSH
Lal25g0139 25 869450 875109 Lal1g0318 1 1940308 1944937 PCT
Lal1g0318 1 1940308 1944937 Lal25g0139 25 869450 875109 PCT