Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0139 ATGGGTAGCCCTAAAAAGAATGAAAATAAGGGCTTTTTCGCTGCCATGAGTTCTGGAATATCCATGTTCAGCAGTGCAATGCATCGTTCTGTCAATGGGTTTCTAGGATATGAAGGGGTAGAAGTCATAAATCCCGATGGAGGTAAAGATGATGCAGAAGAGGAAGCTCAGAGAGGAAGATGGAAACAGGAGGAAAGAGATGGTTACTGGAAGATGATGCACAAATATATTGGCTCAGATGTAACATCAATGGTAACACTACCGGTTATTATTTTTGAACCAATGACTATGCTTCAAAAGATGGCAGAGTTAATGGAGTACTCCTACTTGTTAGATCGGGCAGATGAATGTGAGGATCCATACATGCGGCTGGTGTATGCATCATCTTGGGCAATATCTGTGTACTATGCATACCAACGGACCTGGAAGCCTTTTAATCCTATTCTTGGAGAGACTTATGAAATGGCTAACCATGGTGGAATTTCATTCCTTGCAGAACAGGTGAGTCATCACCCCCCTATGAGTTCTGGACATGCCGAGAATGAGCATTTTGCATATGACGTGACTTCAAAGTTAAAAACTAAGTTTCTGGGAAACTCTGTTGATGTTTACCCTGTTGGAAGAACACGTGTAACCCTCAAGAGGGATGGTGTAATCTTGGATTTGGTGCCACCTCCTACAAAGGTCAATAACTTGATTTTTGGCCGAACTTGGGTTGATTCACCTGGGGATATGATAATGGCGAATTTGACAACTGGGGACAAAGTTGTACTATACTTCCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTATATAATTCTGCCGAGGAGCCTAAAATATTGATGACTGGGAAATGGAATGAGTCAATGAGTTATCAGCCTTGTGATTTGGAAGGAGAGCCTCTTCCAGACACAGAATTGATAGAGGTTTGGCATGTAGCTGATGTTCCAAAGAATGATAAATTTCAGTATACATATTTTGCGCATAAAATAAACAGCTTTGACACTGCCCCTAGAAAATTGTTGGCATCAGACTCTCGTTTACGCCCAGATAGATATGCACTTGAGATGGGTGATATGTCCAAAGCTGGTGCAGAAAAGAGCAGGTTAGAGGAGATGCAGCGCGCTGAAAAGAGAACAAGAGAGGGCAAAGGGCATAACTTCACACCAAGATGGTTTGATTTAACCGAAGAAGTGACATCAACTCCTTGGGGTGATTTAGAAATCTACCAATACAATGGTAAATACAATGAACATAGGGTTGCTATAGCCAACATTGATGATTTTGATAATAAATCAATTGAGTTCAATCCTTGGCAGTATGGTAACTTGTCCACAGAATGA 1362 0.4156 MGSPKKNENKGFFAAMSSGISMFSSAMHRSVNGFLGYEGVEVINPDGGKDDAEEEAQRGRWKQEERDGYWKMMHKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDRADECEDPYMRLVYASSWAISVYYAYQRTWKPFNPILGETYEMANHGGISFLAEQVSHHPPMSSGHAENEHFAYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVILDLVPPPTKVNNLIFGRTWVDSPGDMIMANLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPDTELIEVWHVADVPKNDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDMSKAGAEKSRLEEMQRAEKRTREGKGHNFTPRWFDLTEEVTSTPWGDLEIYQYNGKYNEHRVAIANIDDFDNKSIEFNPWQYGNLSTE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0139 453 Pfam Oxysterol-binding protein 69 426 IPR000648 GO:0008289
Lal25g0139 453 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 450 IPR000648 GO:0008289
Lal25g0139 453 SUPERFAMILY Oxysterol-binding protein-like 63 427 IPR037239 -
Lal25g0139 453 Gene3D - 150 323 - -
Lal25g0139 453 Gene3D - 358 442 - -
Lal25g0139 453 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Lal25g0139 453 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0139 Lal-Chr25 869450 875109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0139 - - gmx:100779808 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0139 25 869450 875109 Lal25g0139 25 869450 875109 ECH
Lal25g0139 25 869450 875109 Lal1g0318 1 1940308 1944937 PCT
Lal25g0139 25 869450 875109 Lal2g0220 2 1286295 1292552 PCT
Lal1g0318 1 1940308 1944937 Lal25g0139 25 869450 875109 PCT
Lal2g0220 2 1286295 1292552 Lal25g0139 25 869450 875109 PCT