Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0175 ATGGCTTCTCTCCCCGCCACCGGTAACGGTCTCATCGTCAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACCACCTCCGGCGTCTCCCTCGCCGAAGCTCCCGGATTCCTCAAGGCTCCCGGTGGCGCCCCTGCTAACGTCGCAATCGCCGTCACTCGCCTCGGCGGCAAAGCTGCATTCGTCGGAAAACTTGGTGATGATGAGTTCGGCCACATGCTCGCTGGGATCTTGAAGGAGAACAACGTCAATGCTGACGGTATCACCTTCGATCAGGGCGCACGTACTGCACTGGCCTTCGTGACCCTACGCGCCGATGGAGAGCGTGAGTTCATGTTCTACAGAAACCCCAGCGCCGATATGCTCCTCAAGCCAGAAGATCTCAATCTTGAACTTATCAGATCTGCTAAAGTATTCCATTATGGATCAATAAGCTTGATAGTGGAGCCATGCAGATCAGCACACCTGAAGGCAATGGAAGTGGCCAAGGAAGCAGGGTGCCTACTCTCTTATGATCCAAACCTCCGGTTACCCTTATGGCCCTCTCCCGAGGAAGCCCGTCAGCAAATGCTCAGCATATGGGACAAGGCTGATATCATCAAGGTCAGTGATGTGGAGCTTGAATTCCTCACTGGCAAAGTTGATGATGCTTCTGCTCTCTCCTTGTGGCATCCCAATTTGAAGTTACTCCTTGTCACTCTTGGCGAACAAGGTTCCAAATACTATACCAAGAATTTCCATGGATCAGTGGATGCTTTTCATGTTAATACAGTGGATACAACTGGAGCGGGTGATTCCTTTGTTGGTGCTCTACTGTGCAAGATTGTTGATGATCAATCCATACTTGAAGATGAACCAAGGTTGAGGGAAATACTCAAGTTTGCAAATGCATCTGGAGCAATTACAACTATTAAAAAGGGAGCAATCCCTGCTCTTCCAACAGAGTCTGATGTCCTCAATCTGATCAAAGGAGCATAG 978 0.5031 MASLPATGNGLIVSFGEMLIDFVPTTSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKAAFVGKLGDDEFGHMLAGILKENNVNADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSPEEARQQMLSIWDKADIIKVSDVELEFLTGKVDDASALSLWHPNLKLLLVTLGEQGSKYYTKNFHGSVDAFHVNTVDTTGAGDSFVGALLCKIVDDQSILEDEPRLREILKFANASGAITTIKKGAIPALPTESDVLNLIKGA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0175 325 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 42 66 IPR002173 GO:0016773
Lal2g0175 325 Gene3D - 10 325 IPR029056 -
Lal2g0175 325 PANTHER BNAA04G18320D PROTEIN 18 324 - -
Lal2g0175 325 PRINTS Ribokinase signature 37 56 IPR002139 GO:0016301
Lal2g0175 325 PRINTS Ribokinase signature 192 207 IPR002139 GO:0016301
Lal2g0175 325 PRINTS Ribokinase signature 230 241 IPR002139 GO:0016301
Lal2g0175 325 SUPERFAMILY Ribokinase-like 12 322 IPR029056 -
Lal2g0175 325 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 259 272 IPR002173 GO:0016773
Lal2g0175 325 CDD bac_FRK 11 309 - -
Lal2g0175 325 Pfam pfkB family carbohydrate kinase 11 314 IPR011611 -
Lal2g0175 325 PANTHER HEXOKINASE FAMILY MEMBER 18 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0175 Lal-Chr2 1041723 1045638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0175 K00847 - gmx:100780082 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0278 1 1629059 1632925 Lal2g0175 2 1041723 1045638 LSH
Lal10g1070 10 17683898 17688184 Lal2g0175 2 1041723 1045638 PCT
Lal2g0175 2 1041723 1045638 Lal10g1070 10 17683898 17688184 PCT